Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is lgt
Identifier: 189026076
GI number: 189026076
Start: 924092
End: 925090
Strand: Reverse
Name: lgt
Synonym: TPASS_0852
Alternate gene names: 189026076
Gene position: 925090-924092 (Counterclockwise)
Preceding gene: 189026077
Following gene: 189026074
Centisome position: 81.19
GC content: 48.45
Gene sequence:
>999_bases ATGTTGAGTATTGTCTATCCGTCGTGGATTCGTCCGGAAATAATTCCTTCTTTTCCCTATTTTCGCTGGTACGGCTTCAT GTATGTGGTTGCATTCAGTATCGCGTACATACTGTTTCGCTACCAGGTGCGGCGCGGTGAGCTTGATAAATGGAGTCGGG TGAGCGAGCCTGTCACGCAGGATGACATTATGAGTTTTTTTACGTGGACGATTCTGGGCATTTTAATAGGGGCGCGTGTT TTTTCCACCATGGTGTATGAGGTCGATTTGCTGTATATGCGCAAGCCATGGCTGATTTTTTGGCCGTTTTCTTTGCAAAC GGGTGAGTGGGTTGGATTGCGAGGAATGTCGTACCACGGTGGGTTAATTGGCGCGCTCGTGGGGGGTGGCTTGTGGACTC AGTCGCATGGGAGAAGCTTTCTTGCATGGGCCGATGTCGCTGCAGCGTCAACTCCACTTGGGTATACTTTTGGAAGAATT GGTAATTTCCTTAATGCTGAATTATATGGGCGTATTACTGATATCCCCATCGGCATGATTTTCCCGAATGTTCCCTTATC TGACATGTTTCCTGCCTCTGAACCTTGGGTGAGGGAGTTTGCACAGAGGGTGGGGATTCACGTGCAAGAAGGTGCACGGC TCGTGAATTTGCCTCGTCACCCTAGCCAAATCTATGAAGCTTTTTTTGAAGGAATTGTGCTGTGGTGTATTTTGTGGTGT GCGCGTCGGGTAAAAACGTATAACGGCTTTTTGGTGTGTTTGTATGTGGTGGGGTACGGAGTGTTTCGTTTTTTTATTGA GTATTTTCGTCAGCCTGATGCGCATTTGGGGTACAGGTTTTCCGCCACGCAATCGTCTCCGATTTACCTTTTCCAGTCAT GGAGTGATGTTTCCACCGGGCAGATTCTGTGTGTTCTAATGATTCTCGCAGGTTTGGGTGGGATGTTCGCACTTTCGGCG TATCACAAGCGGGATAGTGTGCGGAAAGCGCGTGTATGA
Upstream 100 bases:
>100_bases AATACAGTTTACGCGGAGCGTGGTGAATGGTGACAGGATAAACGGAAAACGGTGGCGGGGTAGTGCGCGGTGCATTTCCT TACGCGGTGGAGGTTGTGTG
Downstream 100 bases:
>100_bases AAATGAAAAGAATGCACCGACTGGTCCATCAGCCGAGATGGGGTGGCGCGATGTACCTTGCGTATAATGCGCAAAGGTGA GCCGATTCTTCTTCCGTCGT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MLSIVYPSWIRPEIIPSFPYFRWYGFMYVVAFSIAYILFRYQVRRGELDKWSRVSEPVTQDDIMSFFTWTILGILIGARV FSTMVYEVDLLYMRKPWLIFWPFSLQTGEWVGLRGMSYHGGLIGALVGGGLWTQSHGRSFLAWADVAAASTPLGYTFGRI GNFLNAELYGRITDIPIGMIFPNVPLSDMFPASEPWVREFAQRVGIHVQEGARLVNLPRHPSQIYEAFFEGIVLWCILWC ARRVKTYNGFLVCLYVVGYGVFRFFIEYFRQPDAHLGYRFSATQSSPIYLFQSWSDVSTGQILCVLMILAGLGGMFALSA YHKRDSVRKARV
Sequences:
>Translated_332_residues MLSIVYPSWIRPEIIPSFPYFRWYGFMYVVAFSIAYILFRYQVRRGELDKWSRVSEPVTQDDIMSFFTWTILGILIGARV FSTMVYEVDLLYMRKPWLIFWPFSLQTGEWVGLRGMSYHGGLIGALVGGGLWTQSHGRSFLAWADVAAASTPLGYTFGRI GNFLNAELYGRITDIPIGMIFPNVPLSDMFPASEPWVREFAQRVGIHVQEGARLVNLPRHPSQIYEAFFEGIVLWCILWC ARRVKTYNGFLVCLYVVGYGVFRFFIEYFRQPDAHLGYRFSATQSSPIYLFQSWSDVSTGQILCVLMILAGLGGMFALSA YHKRDSVRKARV >Mature_332_residues MLSIVYPSWIRPEIIPSFPYFRWYGFMYVVAFSIAYILFRYQVRRGELDKWSRVSEPVTQDDIMSFFTWTILGILIGARV FSTMVYEVDLLYMRKPWLIFWPFSLQTGEWVGLRGMSYHGGLIGALVGGGLWTQSHGRSFLAWADVAAASTPLGYTFGRI GNFLNAELYGRITDIPIGMIFPNVPLSDMFPASEPWVREFAQRVGIHVQEGARLVNLPRHPSQIYEAFFEGIVLWCILWC ARRVKTYNGFLVCLYVVGYGVFRFFIEYFRQPDAHLGYRFSATQSSPIYLFQSWSDVSTGQILCVLMILAGLGGMFALSA YHKRDSVRKARV
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=294, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=2e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT_TREPA (O83824)
Other databases:
- EMBL: AE000520 - PIR: D71274 - RefSeq: NP_219288.1 - ProteinModelPortal: O83824 - GeneID: 2611041 - GenomeReviews: AE000520_GR - KEGG: tpa:TP0852 - NMPDR: fig|243276.1.peg.847 - TIGR: TP_0852 - HOGENOM: HBG450278 - OMA: NPIAFSL - ProtClustDB: PRK00052 - BioCyc: TPAL243276:TP_0852-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 38155; Mature: 38155
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x20d2e37c)-; HASH(0x21a423d0)-; HASH(0x21702f5c)-; HASH(0x21cbd690)-; HASH(0xc89ea80)-;
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIVYPSWIRPEIIPSFPYFRWYGFMYVVAFSIAYILFRYQVRRGELDKWSRVSEPVTQ CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH DDIMSFFTWTILGILIGARVFSTMVYEVDLLYMRKPWLIFWPFSLQTGEWVGLRGMSYHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEECCCCCCCC GLIGALVGGGLWTQSHGRSFLAWADVAAASTPLGYTFGRIGNFLNAELYGRITDIPIGMI CHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHCHHHHCEEECCEEEEE FPNVPLSDMFPASEPWVREFAQRVGIHVQEGARLVNLPRHPSQIYEAFFEGIVLWCILWC ECCCCCHHCCCCCCHHHHHHHHHHCCEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ARRVKTYNGFLVCLYVVGYGVFRFFIEYFRQPDAHLGYRFSATQSSPIYLFQSWSDVSTG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCHH QILCVLMILAGLGGMFALSAYHKRDSVRKARV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MLSIVYPSWIRPEIIPSFPYFRWYGFMYVVAFSIAYILFRYQVRRGELDKWSRVSEPVTQ CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCH DDIMSFFTWTILGILIGARVFSTMVYEVDLLYMRKPWLIFWPFSLQTGEWVGLRGMSYHG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCCCCCEEECCCCCCCC GLIGALVGGGLWTQSHGRSFLAWADVAAASTPLGYTFGRIGNFLNAELYGRITDIPIGMI CHHHHHHCCCCEECCCCCEEEHHHHHHHCCCCCCHHHHHHHHHHCHHHHCEEECCEEEEE FPNVPLSDMFPASEPWVREFAQRVGIHVQEGARLVNLPRHPSQIYEAFFEGIVLWCILWC ECCCCCHHCCCCCCHHHHHHHHHHCCEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH ARRVKTYNGFLVCLYVVGYGVFRFFIEYFRQPDAHLGYRFSATQSSPIYLFQSWSDVSTG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEECCCCCCHH QILCVLMILAGLGGMFALSAYHKRDSVRKARV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876