Click here to switch to the map view.

The map label for this gene is 189026040

Identifier: 189026040

GI number: 189026040

Start: 886235

End: 886900

Strand: Reverse

Name: 189026040

Synonym: TPASS_0816

Alternate gene names: NA

Gene position: 886900-886235 (Counterclockwise)

Preceding gene: 189026041

Following gene: 189026037

Centisome position: 77.84

GC content: 52.1

Gene sequence:

>666_bases
ATGTGTTTTATACTCCCGCGTATGGGCGCGGGAGTTTTCGTCAGCGATAATCGCCTTCAGTTTTCTCGTAGTCTCGCAGA
GGTTTTACGTAATCAGGGGTGTCGTGTGTGCTTGAGCGCACACGAGGCAGCTCGTGGGGATGTGCCTGTGCGTGATGGGT
TGGTTTATTGGAATCGCGCGTCTCCCTTTTCATTGCGCGGTATTCTGCTTCAGATTGAAAATCTAGGCATTGTGCTTGAG
ACAGCGGTGTTCGTTTTTGACGCGCAAAGTTATGTAGATCTTTATCCGGGAGATGATTTTTCCAGTATCGATCGGATCTC
GGTGGATTTGATCGTGGCAAATATGGCATTGGTGCACATGCTGACTGCGCATTTTGTCAGTCAGGCGCGTGGGAAACTTC
TGTTTGTGCACCGGGAGACGAGCGCGCACTGTGCGTCTGCTATGGTATCTGTTGCGTCTGCCGCTTTTGTGCGCATGGCG
GAGGAGTGCGTGCTCGGTCTTGCGCGAAAGGATGCACCGCGTATGCAGACATTGTTAATACGGCTTGACGGAGTTGACGA
CGATTCCTATACGCAGTGGATTGCAACGCAGCTTGCATCTCCGGTTCTGTCACGTGGCCCTGGGCGATGGGTAAGGGCTG
GTCAACGTAGCTTTTTTGGAAAATAG

Upstream 100 bases:

>100_bases
ACGGGGCAGAGAACGCAGGACTCCGTGTCGTTTCTTCTTTACTTCCTGGCGGAATGGTTGCTGGTCTTTCTGCTGTGAGG
ACGCTTTTATCTTCGCCAGG

Downstream 100 bases:

>100_bases
AGGTCACGCGACGTTGTCTTTCCCTTTCGTTGCCGTGTTCTTCTCTTTTAACGTCTTTATTGTTTGCTTCGCTATAGATT
AATGACGCGGTATAATCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MCFILPRMGAGVFVSDNRLQFSRSLAEVLRNQGCRVCLSAHEAARGDVPVRDGLVYWNRASPFSLRGILLQIENLGIVLE
TAVFVFDAQSYVDLYPGDDFSSIDRISVDLIVANMALVHMLTAHFVSQARGKLLFVHRETSAHCASAMVSVASAAFVRMA
EECVLGLARKDAPRMQTLLIRLDGVDDDSYTQWIATQLASPVLSRGPGRWVRAGQRSFFGK

Sequences:

>Translated_221_residues
MCFILPRMGAGVFVSDNRLQFSRSLAEVLRNQGCRVCLSAHEAARGDVPVRDGLVYWNRASPFSLRGILLQIENLGIVLE
TAVFVFDAQSYVDLYPGDDFSSIDRISVDLIVANMALVHMLTAHFVSQARGKLLFVHRETSAHCASAMVSVASAAFVRMA
EECVLGLARKDAPRMQTLLIRLDGVDDDSYTQWIATQLASPVLSRGPGRWVRAGQRSFFGK
>Mature_221_residues
MCFILPRMGAGVFVSDNRLQFSRSLAEVLRNQGCRVCLSAHEAARGDVPVRDGLVYWNRASPFSLRGILLQIENLGIVLE
TAVFVFDAQSYVDLYPGDDFSSIDRISVDLIVANMALVHMLTAHFVSQARGKLLFVHRETSAHCASAMVSVASAAFVRMA
EECVLGLARKDAPRMQTLLIRLDGVDDDSYTQWIATQLASPVLSRGPGRWVRAGQRSFFGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y816_TREPA (O83792)

Other databases:

- EMBL:   AE000520
- PIR:   E71278
- RefSeq:   NP_219252.1
- ProteinModelPortal:   O83792
- IntAct:   O83792
- GeneID:   2610898
- GenomeReviews:   AE000520_GR
- KEGG:   tpa:TP0816
- NMPDR:   fig|243276.1.peg.811
- TIGR:   TP_0816
- HOGENOM:   HBG251072
- OMA:   INIAADT
- ProtClustDB:   CLSK218879
- BioCyc:   TPAL243276:TP_0816-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24379; Mature: 24379

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCFILPRMGAGVFVSDNRLQFSRSLAEVLRNQGCRVCLSAHEAARGDVPVRDGLVYWNRA
CEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCEEEECCC
SPFSLRGILLQIENLGIVLETAVFVFDAQSYVDLYPGDDFSSIDRISVDLIVANMALVHM
CCCCHHHEEEEEECCCCHHHHHHHEEECCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LTAHFVSQARGKLLFVHRETSAHCASAMVSVASAAFVRMAEECVLGLARKDAPRMQTLLI
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEE
RLDGVDDDSYTQWIATQLASPVLSRGPGRWVRAGQRSFFGK
EEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCC
>Mature Secondary Structure
MCFILPRMGAGVFVSDNRLQFSRSLAEVLRNQGCRVCLSAHEAARGDVPVRDGLVYWNRA
CEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECHHHHCCCCCCCCCEEEECCC
SPFSLRGILLQIENLGIVLETAVFVFDAQSYVDLYPGDDFSSIDRISVDLIVANMALVHM
CCCCHHHEEEEEECCCCHHHHHHHEEECCHHEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LTAHFVSQARGKLLFVHRETSAHCASAMVSVASAAFVRMAEECVLGLARKDAPRMQTLLI
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEE
RLDGVDDDSYTQWIATQLASPVLSRGPGRWVRAGQRSFFGK
EEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876