Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is yqeW [H]
Identifier: 189025996
GI number: 189025996
Start: 839396
End: 841177
Strand: Reverse
Name: yqeW [H]
Synonym: TPASS_0771
Alternate gene names: 189025996
Gene position: 841177-839396 (Counterclockwise)
Preceding gene: 189025998
Following gene: 189025990
Centisome position: 73.82
GC content: 46.3
Gene sequence:
>1782_bases ATGTCACGGCGAGACTATTTGAGAAAAGAGAGATTGACTAATAAACATACGTCCGTACGGCGCAGTGTCCCGCTTCGGAC AATTGATACGTATCCCCTGTTTTTGCTATGGTGGGCGCCGATGCACCTTGTGGCTGTCCTTTTGCAGGGTATCGGAAGCC TTGGCTTCATGCTCTTTGGTATGAAGCTGATGAGTGACGGTATCCAAAAGGGTACTGGAGAAAGCCTCCACAAAATTCTC CAAGTGATGACCAGTAACTGTTTCTTCGCGGTGCTAACCGGCATGGCAGTTACCGCTATTGTGCAGTCGTCAGGGGCTAC GACGGTTATGACGATTTCTTTTATTAACGCGGGAGTGCTTTCTTTGACGCAGTCAATCGGCGTAATTCTTGGTGCGAATA TCGGTACCACTGTTACTGCTTGGATTGTTGCGCTTGTGGGTTTTCAGTTTAAGCTTGCGTCAATCGCTGTCCCCGCCTTT GGGATTGGCTATTTTCTGACTTTTTTTAAACACTTGCATAAAGGACATTTGGGCGAGAGCATCATGGGCTTTGGTCTTCT CTTTACCGGGCTTGGTTTGCTCTCTTCGCTCATTCCTCCACTTTCTGTAGAAGAGCTTTCCTTCCTTAAAATTGCAGTTG AGGATCGTGCGCTCAGTGTTTTTGTAGGACTCCTATCAGGCTTTGTGTTAACGGTCATCTTGCACTCCTCGTCTGCAACC ACTGCGATCGTGTTGACTATGGCGTTCGGTGGTGTCATCGGAGTGGAGTTCGCTGCAGCAAGCGTATTAGGAAGTAATGT GGGCTCTACCATTGATGCTGCAATTGCAGCCATTGGGAGTAAATTGAACGCACGGAGAGCTGCCGCAGTCCACGTGCTGT TTAATGTGTTTGGTGCATTGGTTTTTTTGATGTTTTTTCATCCAGTTTTGGCACTCTTGTGTGTTTTGACTCCAAAGAAT TCGGGTTTTGATAACATCACAGTGCGGCTTGCGCTCTTTCACAGTATGTTTAACATCGTCAACACTATTATTGTGTTTCC CTTCACTAAGCACCTTGCAGCGTTTGTAGAGTGGTTAATTCGTCCTCGGTATGACGACGCTCCAGAAAGGTATCAGCTTG TTTTTCAAGAAACTGCGGTAAAAGAGAGCGCTGAGGCACATATTTTTCGTGCGGAAATTGAACTGAAAAAAATGTTTTCA ATAGCACAGGGTATGCTTGTTACTATCCGTAAGTCCATTCAGGGAACGTGTATGCTTTCTACTGATGAGATCGTAACACG CCTGACAAAGGAAGAGGATTATGCAGATCAAATGCAGGAACAGCTTTCGCGCTTTCTGATTAAAACATCGCATCTTTCTT TGAGCGAGAAAGCAAAACATAACGTGCAATTAATGTTTTCCATTGCAGACGATATTGAAAATATTACTGACCATTTGTGT GGTATAGGGTTGTACTTCCATAAGAGCATCAAGGGAAATGTACCGCTCAAGCGTGATGATATCGAGGAGTTAGTCCCGTA CGTCGGCATGGTGGATGAGTGCGTTGACTTTGTGTATTCGCACTTGAACCGTCCACTGGAAGATAAGCAGGTGTTGCACG TAAACCAAATGACGCACTCTATCGAAAGCAAGGGGGCCCATCTAAAAGGACTTGTGCGCAGACGTCTTGAGCAGGGTGCA GATGTAAAGGCGGAGCTCCTGTATATGGACATCGTGCGTGGTATAGAAGCCGTCGGTAACTATGCCCTTAGTATCTCGCG CTGGCTTGCACGAATGCTGTAG
Upstream 100 bases:
>100_bases CGCGACATAACCTGATTCCCCACTTCCGTAAAGGCAGAGTGGAGGGAGAAAGCATACAAAATCCTAGCGTTTCCATGGGA CGCAGCGTAGCACACAAGCG
Downstream 100 bases:
>100_bases TGGCGCAGTGAGCCGCTGCATCAATCAAGGCGATGTTCTTGGGGAGGGGGAAGAGAATCCTCCGGTTTCCCAGAAGCCTT CTTAGAGGAAGAGGTTCTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 593; Mature: 592
Protein sequence:
>593_residues MSRRDYLRKERLTNKHTSVRRSVPLRTIDTYPLFLLWWAPMHLVAVLLQGIGSLGFMLFGMKLMSDGIQKGTGESLHKIL QVMTSNCFFAVLTGMAVTAIVQSSGATTVMTISFINAGVLSLTQSIGVILGANIGTTVTAWIVALVGFQFKLASIAVPAF GIGYFLTFFKHLHKGHLGESIMGFGLLFTGLGLLSSLIPPLSVEELSFLKIAVEDRALSVFVGLLSGFVLTVILHSSSAT TAIVLTMAFGGVIGVEFAAASVLGSNVGSTIDAAIAAIGSKLNARRAAAVHVLFNVFGALVFLMFFHPVLALLCVLTPKN SGFDNITVRLALFHSMFNIVNTIIVFPFTKHLAAFVEWLIRPRYDDAPERYQLVFQETAVKESAEAHIFRAEIELKKMFS IAQGMLVTIRKSIQGTCMLSTDEIVTRLTKEEDYADQMQEQLSRFLIKTSHLSLSEKAKHNVQLMFSIADDIENITDHLC GIGLYFHKSIKGNVPLKRDDIEELVPYVGMVDECVDFVYSHLNRPLEDKQVLHVNQMTHSIESKGAHLKGLVRRRLEQGA DVKAELLYMDIVRGIEAVGNYALSISRWLARML
Sequences:
>Translated_593_residues MSRRDYLRKERLTNKHTSVRRSVPLRTIDTYPLFLLWWAPMHLVAVLLQGIGSLGFMLFGMKLMSDGIQKGTGESLHKIL QVMTSNCFFAVLTGMAVTAIVQSSGATTVMTISFINAGVLSLTQSIGVILGANIGTTVTAWIVALVGFQFKLASIAVPAF GIGYFLTFFKHLHKGHLGESIMGFGLLFTGLGLLSSLIPPLSVEELSFLKIAVEDRALSVFVGLLSGFVLTVILHSSSAT TAIVLTMAFGGVIGVEFAAASVLGSNVGSTIDAAIAAIGSKLNARRAAAVHVLFNVFGALVFLMFFHPVLALLCVLTPKN SGFDNITVRLALFHSMFNIVNTIIVFPFTKHLAAFVEWLIRPRYDDAPERYQLVFQETAVKESAEAHIFRAEIELKKMFS IAQGMLVTIRKSIQGTCMLSTDEIVTRLTKEEDYADQMQEQLSRFLIKTSHLSLSEKAKHNVQLMFSIADDIENITDHLC GIGLYFHKSIKGNVPLKRDDIEELVPYVGMVDECVDFVYSHLNRPLEDKQVLHVNQMTHSIESKGAHLKGLVRRRLEQGA DVKAELLYMDIVRGIEAVGNYALSISRWLARML >Mature_592_residues SRRDYLRKERLTNKHTSVRRSVPLRTIDTYPLFLLWWAPMHLVAVLLQGIGSLGFMLFGMKLMSDGIQKGTGESLHKILQ VMTSNCFFAVLTGMAVTAIVQSSGATTVMTISFINAGVLSLTQSIGVILGANIGTTVTAWIVALVGFQFKLASIAVPAFG IGYFLTFFKHLHKGHLGESIMGFGLLFTGLGLLSSLIPPLSVEELSFLKIAVEDRALSVFVGLLSGFVLTVILHSSSATT AIVLTMAFGGVIGVEFAAASVLGSNVGSTIDAAIAAIGSKLNARRAAAVHVLFNVFGALVFLMFFHPVLALLCVLTPKNS GFDNITVRLALFHSMFNIVNTIIVFPFTKHLAAFVEWLIRPRYDDAPERYQLVFQETAVKESAEAHIFRAEIELKKMFSI AQGMLVTIRKSIQGTCMLSTDEIVTRLTKEEDYADQMQEQLSRFLIKTSHLSLSEKAKHNVQLMFSIADDIENITDHLCG IGLYFHKSIKGNVPLKRDDIEELVPYVGMVDECVDFVYSHLNRPLEDKQVLHVNQMTHSIESKGAHLKGLVRRRLEQGAD VKAELLYMDIVRGIEAVGNYALSISRWLARML
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjbB [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=324, Percent_Identity=26.8518518518519, Blast_Score=97, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 65375; Mature: 65244
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRDYLRKERLTNKHTSVRRSVPLRTIDTYPLFLLWWAPMHLVAVLLQGIGSLGFMLFG CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKLMSDGIQKGTGESLHKILQVMTSNCFFAVLTGMAVTAIVQSSGATTVMTISFINAGVL HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH SLTQSIGVILGANIGTTVTAWIVALVGFQFKLASIAVPAFGIGYFLTFFKHLHKGHLGES HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHH IMGFGLLFTGLGLLSSLIPPLSVEELSFLKIAVEDRALSVFVGLLSGFVLTVILHSSSAT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TAIVLTMAFGGVIGVEFAAASVLGSNVGSTIDAAIAAIGSKLNARRAAAVHVLFNVFGAL HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLMFFHPVLALLCVLTPKNSGFDNITVRLALFHSMFNIVNTIIVFPFTKHLAAFVEWLI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPRYDDAPERYQLVFQETAVKESAEAHIFRAEIELKKMFSIAQGMLVTIRKSIQGTCMLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC TDEIVTRLTKEEDYADQMQEQLSRFLIKTSHLSLSEKAKHNVQLMFSIADDIENITDHLC HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHH GIGLYFHKSIKGNVPLKRDDIEELVPYVGMVDECVDFVYSHLNRPLEDKQVLHVNQMTHS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IESKGAHLKGLVRRRLEQGADVKAELLYMDIVRGIEAVGNYALSISRWLARML HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SRRDYLRKERLTNKHTSVRRSVPLRTIDTYPLFLLWWAPMHLVAVLLQGIGSLGFMLFG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKLMSDGIQKGTGESLHKILQVMTSNCFFAVLTGMAVTAIVQSSGATTVMTISFINAGVL HHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHH SLTQSIGVILGANIGTTVTAWIVALVGFQFKLASIAVPAFGIGYFLTFFKHLHKGHLGES HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHH IMGFGLLFTGLGLLSSLIPPLSVEELSFLKIAVEDRALSVFVGLLSGFVLTVILHSSSAT HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH TAIVLTMAFGGVIGVEFAAASVLGSNVGSTIDAAIAAIGSKLNARRAAAVHVLFNVFGAL HHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VFLMFFHPVLALLCVLTPKNSGFDNITVRLALFHSMFNIVNTIIVFPFTKHLAAFVEWLI HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RPRYDDAPERYQLVFQETAVKESAEAHIFRAEIELKKMFSIAQGMLVTIRKSIQGTCMLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC TDEIVTRLTKEEDYADQMQEQLSRFLIKTSHLSLSEKAKHNVQLMFSIADDIENITDHLC HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEHHHHHHHHHHHHHH GIGLYFHKSIKGNVPLKRDDIEELVPYVGMVDECVDFVYSHLNRPLEDKQVLHVNQMTHS HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH IESKGAHLKGLVRRRLEQGADVKAELLYMDIVRGIEAVGNYALSISRWLARML HHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8969508; 9023197; 9384377 [H]