Definition | Treponema pallidum subsp. pallidum SS14, complete genome. |
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Accession | NC_010741 |
Length | 1,139,457 |
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The map label for this gene is 189025965
Identifier: 189025965
GI number: 189025965
Start: 806908
End: 807474
Strand: Reverse
Name: 189025965
Synonym: TPASS_0740
Alternate gene names: NA
Gene position: 807474-806908 (Counterclockwise)
Preceding gene: 189025966
Following gene: 189025964
Centisome position: 70.86
GC content: 55.38
Gene sequence:
>567_bases GTGGACGCGTACGCGCGCGCAGTGCTTTCGCCACCTAGGTATGAGCATTCGCGTCGTGTAGCGGAGTTTGGGTGCATGCT GGTACGGCGGTATGCGTTGGAAGCGCAGCTTGAGCCGCACGTTTATTGCGCGGGTATTGCGCACGATATGTGCCGGGAGC ATTCGGAAGTGTTCTTGTTGCGTGCTGCTGCGTGCGATGGTTTTCCCATTGATGTAACTGAGCGTGGTACGCCATTGCTC TTGCACGGGCGCGCAGCCGCGTGTGTGTTAGCACAGGAATTTGGCGTGCAGGATGAGGTGTTGTTGTCTGCGGTGCGCTG GCATACCTTTGGGTGTGAAGACTTTGGTGTGTTAGGAAAGATTCTTTTTATATCAGACAAAATTGAGCCAGCTCGTGCTT GGGCGGCGTCCTTGCGCGGTGCAGTGTCAACGTTAACGTTAGATGCGCTTGCTGCAAAAGTAGTGAGTGCGAGTATTGTG TGCGCAGAGCGAAAACGTACCACGCCCCATCCGCGTACGTGTGCGATGTTGCGTGCACTGGGAAAGGATGTAAGTCAACC CGCGTAA
Upstream 100 bases:
>100_bases CGATTCTTCCTGTTCTTCTCGTTTTCTTTCTTTCCTTGGACAGGCGCAGATGCCAGCGTTCTCTTTTGTGTCTGCAGATA TGACGGCGCTGATTGCGCGT
Downstream 100 bases:
>100_bases CGGGTGGCAGTCGGGCAAAAGTAGGGCAGTGTGTGTATCTGCCGCAGTTCGACGAGAGGCCAGGGAGTGTGCAATGAAAG TGTTGGATATGGGAAGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; HD Domain-Containing Protein; Nicotinate-Nucleotide Adenylyltransferase; HD Superfamily Hydrolase
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDAYARAVLSPPRYEHSRRVAEFGCMLVRRYALEAQLEPHVYCAGIAHDMCREHSEVFLLRAAACDGFPIDVTERGTPLL LHGRAAACVLAQEFGVQDEVLLSAVRWHTFGCEDFGVLGKILFISDKIEPARAWAASLRGAVSTLTLDALAAKVVSASIV CAERKRTTPHPRTCAMLRALGKDVSQPA
Sequences:
>Translated_188_residues MDAYARAVLSPPRYEHSRRVAEFGCMLVRRYALEAQLEPHVYCAGIAHDMCREHSEVFLLRAAACDGFPIDVTERGTPLL LHGRAAACVLAQEFGVQDEVLLSAVRWHTFGCEDFGVLGKILFISDKIEPARAWAASLRGAVSTLTLDALAAKVVSASIV CAERKRTTPHPRTCAMLRALGKDVSQPA >Mature_188_residues MDAYARAVLSPPRYEHSRRVAEFGCMLVRRYALEAQLEPHVYCAGIAHDMCREHSEVFLLRAAACDGFPIDVTERGTPLL LHGRAAACVLAQEFGVQDEVLLSAVRWHTFGCEDFGVLGKILFISDKIEPARAWAASLRGAVSTLTLDALAAKVVSASIV CAERKRTTPHPRTCAMLRALGKDVSQPA
Specific function: Unknown
COG id: COG1713
COG function: function code H; Predicted HD superfamily hydrolase involved in NAD metabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20548; Mature: 20548
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAYARAVLSPPRYEHSRRVAEFGCMLVRRYALEAQLEPHVYCAGIAHDMCREHSEVFLL CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHEEEE RAAACDGFPIDVTERGTPLLLHGRAAACVLAQEFGVQDEVLLSAVRWHTFGCEDFGVLGK EECCCCCCCCEECCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHE ILFISDKIEPARAWAASLRGAVSTLTLDALAAKVVSASIVCAERKRTTPHPRTCAMLRAL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GKDVSQPA HHHCCCCC >Mature Secondary Structure MDAYARAVLSPPRYEHSRRVAEFGCMLVRRYALEAQLEPHVYCAGIAHDMCREHSEVFLL CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHEEEE RAAACDGFPIDVTERGTPLLLHGRAAACVLAQEFGVQDEVLLSAVRWHTFGCEDFGVLGK EECCCCCCCCEECCCCCEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHE ILFISDKIEPARAWAASLRGAVSTLTLDALAAKVVSASIVCAERKRTTPHPRTCAMLRAL EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH GKDVSQPA HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA