| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586565
Identifier: 188586565
GI number: 188586565
Start: 2060377
End: 2061279
Strand: Reverse
Name: 188586565
Synonym: Nther_1952
Alternate gene names: NA
Gene position: 2061279-2060377 (Counterclockwise)
Preceding gene: 188586566
Following gene: 188586564
Centisome position: 65.12
GC content: 36.77
Gene sequence:
>903_bases TTGGCCCATCTCAGTCAAGCGGTCTATTTTGCACCTAGAGGAAGGTGGCGCTTGTTGGAACTTGGTGATCATATACTCCG ACACTATATTAGTATTGATGATAAATTAATAGGTTTTGTAGGAGGACCAGGGGCTGGTAAATCCGTGTTGATTGAAGGTA TGTTAAAGGAGTTCACTTTAACTAACGACGATAATGGTGTCAATATTAGGCCACTTCCTATATTAGAAGCTTATTACAAT GGGTATTTTAAACATAATACCTATCATATTGATGCCCAATTTGAATTAGCTTTTTATACAGCTGAAGAAATTACAAAAGC TATTATTACAGCTATTTCTCATGAACGAAGGGTTATTATAGAACACTTTGAAAAGATATATCCCTATTTAAATATTAATG CTCAGGTATTAATCGGTGTCGGGGAAGAAGTGATTGTGACGAGGCCTCAATTATTTGGCCCGGATCCCAAAGATTTATCA AAACACGTTGAGCGTTCACTTATCTACAGGAAAATGGCTCATACTGCAGAAGAGTTAGTAAGCTTAGCCCTAAAAGTCCA AAACTGGTCTCTTCCAAACAATTATAGCGAAGTTCAACATGGATTCGTAATGGAATTTGATTCTTATCCAGACATTGATT TACAAATAGTTGATGAAATGGTGAATGAATGGATAAAGGAAGATCTTCCCGTCCACCCCGAACCAGAAAATAACCGGTTG CAAATAGGTGATTATCATGATATTTATTGTACAGGGCCACGTGTCCATGTAAGAAGTACAGGAGAGATTGAAAGTTTTCA ATTGAATTCTAAATTTGTAAAAGATCCTATTTTACAGCGATTTATGTTAATCGGCAGAGTAGGGGAGGCAAGGGGATCAT TACTGTCTTTTAATTTGGAATAG
Upstream 100 bases:
>100_bases ATAGTAAAATTTTACAGTCATCAACATTCAACTTAAATACAACCAAAATTTAACGAATTTGTTATTTTAATGAAGACTGT ATTCTAAGGAGGAATAGTTT
Downstream 100 bases:
>100_bases TTTTTAAGGACTTTAAGGACATAAAAAACAAAGGAGTGACACTATGAGAGAAAACAGAAAAGTTGACGAAATTCGTCCTG TTAAAATTGAAACTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MAHLSQAVYFAPRGRWRLLELGDHILRHYISIDDKLIGFVGGPGAGKSVLIEGMLKEFTLTNDDNGVNIRPLPILEAYYN GYFKHNTYHIDAQFELAFYTAEEITKAIITAISHERRVIIEHFEKIYPYLNINAQVLIGVGEEVIVTRPQLFGPDPKDLS KHVERSLIYRKMAHTAEELVSLALKVQNWSLPNNYSEVQHGFVMEFDSYPDIDLQIVDEMVNEWIKEDLPVHPEPENNRL QIGDYHDIYCTGPRVHVRSTGEIESFQLNSKFVKDPILQRFMLIGRVGEARGSLLSFNLE
Sequences:
>Translated_300_residues MAHLSQAVYFAPRGRWRLLELGDHILRHYISIDDKLIGFVGGPGAGKSVLIEGMLKEFTLTNDDNGVNIRPLPILEAYYN GYFKHNTYHIDAQFELAFYTAEEITKAIITAISHERRVIIEHFEKIYPYLNINAQVLIGVGEEVIVTRPQLFGPDPKDLS KHVERSLIYRKMAHTAEELVSLALKVQNWSLPNNYSEVQHGFVMEFDSYPDIDLQIVDEMVNEWIKEDLPVHPEPENNRL QIGDYHDIYCTGPRVHVRSTGEIESFQLNSKFVKDPILQRFMLIGRVGEARGSLLSFNLE >Mature_299_residues AHLSQAVYFAPRGRWRLLELGDHILRHYISIDDKLIGFVGGPGAGKSVLIEGMLKEFTLTNDDNGVNIRPLPILEAYYNG YFKHNTYHIDAQFELAFYTAEEITKAIITAISHERRVIIEHFEKIYPYLNINAQVLIGVGEEVIVTRPQLFGPDPKDLSK HVERSLIYRKMAHTAEELVSLALKVQNWSLPNNYSEVQHGFVMEFDSYPDIDLQIVDEMVNEWIKEDLPVHPEPENNRLQ IGDYHDIYCTGPRVHVRSTGEIESFQLNSKFVKDPILQRFMLIGRVGEARGSLLSFNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34465; Mature: 34334
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHLSQAVYFAPRGRWRLLELGDHILRHYISIDDKLIGFVGGPGAGKSVLIEGMLKEFTL CCCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEE TNDDNGVNIRPLPILEAYYNGYFKHNTYHIDAQFELAFYTAEEITKAIITAISHERRVII CCCCCCCEEECCHHHHHHHCCEEECCEEEEEEEEEEEEECHHHHHHHHHHHHCCCCHHHH EHFEKIYPYLNINAQVLIGVGEEVIVTRPQLFGPDPKDLSKHVERSLIYRKMAHTAEELV HHHHHHCCEECCCEEEEEECCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLALKVQNWSLPNNYSEVQHGFVMEFDSYPDIDLQIVDEMVNEWIKEDLPVHPEPENNRL HHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE QIGDYHDIYCTGPRVHVRSTGEIESFQLNSKFVKDPILQRFMLIGRVGEARGSLLSFNLE EECCCCEEEEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC >Mature Secondary Structure AHLSQAVYFAPRGRWRLLELGDHILRHYISIDDKLIGFVGGPGAGKSVLIEGMLKEFTL CCCCCEEEECCCCCEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHEE TNDDNGVNIRPLPILEAYYNGYFKHNTYHIDAQFELAFYTAEEITKAIITAISHERRVII CCCCCCCEEECCHHHHHHHCCEEECCEEEEEEEEEEEEECHHHHHHHHHHHHCCCCHHHH EHFEKIYPYLNINAQVLIGVGEEVIVTRPQLFGPDPKDLSKHVERSLIYRKMAHTAEELV HHHHHHCCEECCCEEEEEECCCEEEEECCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLALKVQNWSLPNNYSEVQHGFVMEFDSYPDIDLQIVDEMVNEWIKEDLPVHPEPENNRL HHHHHHCCCCCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEE QIGDYHDIYCTGPRVHVRSTGEIESFQLNSKFVKDPILQRFMLIGRVGEARGSLLSFNLE EECCCCEEEEECCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA