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The map label for this gene is 188586547

Identifier: 188586547

GI number: 188586547

Start: 2033872

End: 2034960

Strand: Reverse

Name: 188586547

Synonym: Nther_1933

Alternate gene names: NA

Gene position: 2034960-2033872 (Counterclockwise)

Preceding gene: 188586549

Following gene: 188586546

Centisome position: 64.28

GC content: 37.56

Gene sequence:

>1089_bases
ATGAAAAGCGAATTAGTTTCAGGTTTAAAGCTAGAAAATCTACCAACTCCAGCTCTACTACTTGATATGAGTAACCTAGA
GTACAATATAAATTTATTAGCTGATTTTTTTAGAGACAAGCCTTGTGATATCAGGCCACATATGAAAGGTCATAAAAATT
TAACTATTGCACATATGCAAATTGATAGAGGTGCTATTGGAGTGACTTGTGCCAAAACGAGTGAAGCAGAAGTGATGGTC
AACGGAGGAATTAAAGACATTTTGATTGCTAATCAGGTAATAGAAAGCGGGAAAATAAATCTTTTAGCTGAACTGGCAAG
GCGCGCAGATATAAAAGTTGCAGTGGATAGCTATCAAAATTGTGAAAATTTATCCCGTATAGCAGTTGAGCATGGTGTAA
CTATAGGGGTTCTTGTAGAAATGGATATTGGACTTGGAAGATGTGGCGTGAAGAGCTTTGATGAAGGCATAAATCTTGTT
CAGGAGATACAAAAACTTGATAATCTTGAATTTCGCGGTGTCATGGGTTATGAGGGACCTTTTAGAGACAAAACTCAGTC
TGAGAAATCTGATATGGTTAAAGAGAGTTTGAGTCGAGTTGTTCAATTAAAGCGAAGAATAGAACAGGAAAATATCCAAG
TTGAAATTGTCAGTTGCGGCAGTACAGGTACTTGGGATATTACTGGTAATTACCCCGAAATAACAGAAATCCAGGCTGGT
ACTTATCCATTAATGGAAGTGCCCTATTTAGAGGATGGGTTACCCTTCAAATCAGCTTTATCTGTATTGGCCACAGTAAT
CAGTAAGTCTCATGATAAATTAATACTGGATTGTGGTTTGAAAGCCGTGACAGATGATCAAGGAATACCCAAATTGATGG
ATTATGACAGTCCTATTGTCGGAATTAACGAAGAACACAGCATAGTTGAGATTGATCACGAAACGGAAAAACTGGAGATT
GGAGATAAAATTAGGATATTGCCAGCACATTCATGTACGACAGTGAATTTGTACGATTACTATTGTTGTCTTCGAAATAA
CGAAGTTGTTGATATCTGGCAGGTTCATGCCAGAGGAATGGTCACTTGA

Upstream 100 bases:

>100_bases
AGTACTTAGAAAAACCCTGTATTTTACTAAAAATTTTGTTAAATATAAGAAAATTTAGTATCATATATGTATAAAAATTA
TTGAAAGAGGTGATCTCAAA

Downstream 100 bases:

>100_bases
CTTATATATTATCTATGGTATAGGAAAATGGAAATTAATTTTAATCTTAGAGGTGATAAAAGTTGACACTTAAAGTTTCA
CAAGTAATAGTCAATTGTTT

Product: alanine racemase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MKSELVSGLKLENLPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQIDRGAIGVTCAKTSEAEVMV
NGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQNCENLSRIAVEHGVTIGVLVEMDIGLGRCGVKSFDEGINLV
QEIQKLDNLEFRGVMGYEGPFRDKTQSEKSDMVKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAG
TYPLMEVPYLEDGLPFKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSPIVGINEEHSIVEIDHETEKLEI
GDKIRILPAHSCTTVNLYDYYCCLRNNEVVDIWQVHARGMVT

Sequences:

>Translated_362_residues
MKSELVSGLKLENLPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQIDRGAIGVTCAKTSEAEVMV
NGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQNCENLSRIAVEHGVTIGVLVEMDIGLGRCGVKSFDEGINLV
QEIQKLDNLEFRGVMGYEGPFRDKTQSEKSDMVKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAG
TYPLMEVPYLEDGLPFKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSPIVGINEEHSIVEIDHETEKLEI
GDKIRILPAHSCTTVNLYDYYCCLRNNEVVDIWQVHARGMVT
>Mature_362_residues
MKSELVSGLKLENLPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQIDRGAIGVTCAKTSEAEVMV
NGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQNCENLSRIAVEHGVTIGVLVEMDIGLGRCGVKSFDEGINLV
QEIQKLDNLEFRGVMGYEGPFRDKTQSEKSDMVKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAG
TYPLMEVPYLEDGLPFKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSPIVGINEEHSIVEIDHETEKLEI
GDKIRILPAHSCTTVNLYDYYCCLRNNEVVDIWQVHARGMVT

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 40274; Mature: 40274

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSELVSGLKLENLPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQ
CCCHHHCCCEECCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
IDRGAIGVTCAKTSEAEVMVNGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQN
ECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCC
CENLSRIAVEHGVTIGVLVEMDIGLGRCGVKSFDEGINLVQEIQKLDNLEFRGVMGYEGP
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
FRDKTQSEKSDMVKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEECCC
TYPLMEVPYLEDGLPFKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSPIV
CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHHCCCCCEE
GINEEHSIVEIDHETEKLEIGDKIRILPAHSCTTVNLYDYYCCLRNNEVVDIWQVHARGM
CCCCCCCEEEECCCCCEEECCCEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC
VT
CC
>Mature Secondary Structure
MKSELVSGLKLENLPTPALLLDMSNLEYNINLLADFFRDKPCDIRPHMKGHKNLTIAHMQ
CCCHHHCCCEECCCCCCEEEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEE
IDRGAIGVTCAKTSEAEVMVNGGIKDILIANQVIESGKINLLAELARRADIKVAVDSYQN
ECCCCEEEEEECCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCC
CENLSRIAVEHGVTIGVLVEMDIGLGRCGVKSFDEGINLVQEIQKLDNLEFRGVMGYEGP
HHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
FRDKTQSEKSDMVKESLSRVVQLKRRIEQENIQVEIVSCGSTGTWDITGNYPEITEIQAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECCCCCCEEECCC
TYPLMEVPYLEDGLPFKSALSVLATVISKSHDKLILDCGLKAVTDDQGIPKLMDYDSPIV
CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHHCCCCCEE
GINEEHSIVEIDHETEKLEIGDKIRILPAHSCTTVNLYDYYCCLRNNEVVDIWQVHARGM
CCCCCCCEEEECCCCCEEECCCEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEECCCCC
VT
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]