Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is 188586521

Identifier: 188586521

GI number: 188586521

Start: 2001288

End: 2002346

Strand: Reverse

Name: 188586521

Synonym: Nther_1907

Alternate gene names: NA

Gene position: 2002346-2001288 (Counterclockwise)

Preceding gene: 188586522

Following gene: 188586520

Centisome position: 63.25

GC content: 33.81

Gene sequence:

>1059_bases
GTGAATAATAAAATAATCGATAGTATATTAAATAAATCTATAACCACTTTAGCTATTATTGGAATGGAAAAAAATACAGG
TAAAACTGTAACTTTAAATACTGTTATCTCAGAGGCTATGAACAAAGATTTAAGGTTGGCGCTTTTATCTTATGGGCGTG
ATGGTGAAGAAGTTGATGCCATTACCAGACACAAAAAACCCAGGGTATATATTCCACCTAGAACCTTATTTCTAACAACT
AGTGAAGCTGCAAATAAATCGGAAATAACAACGAAACTTGTTAAAGAACTAGAATACCGTACCACAATGGGTAGAGTGGG
AATTTATGAAAGTGGAGATTACGGGGGTAATTGTGAACTTGTCGGGATTAACTCGGCAAACCAAATTTATCAAGTAAAAA
AACAGCTGGAAAATCAAATAGACCTATTATTAATCGATGGAGCTTTGGATAGAAAAAGTTCGGCTATGCCTAGCTTAAGT
GAAGGTTTTGTATTAGCAACTGGAGCTAATATTGCTAACACTGAGGAGCTAGTGGCTAAAAAAACAATTATTGAAATTGA
CAAACTAACTACCCCTGAAATTAATGATGAAGCTTTACAGGTAAAAGCTAGTCAATTACTGGAAAACGGTCATACTGGAG
TGATCACTAAAACAGGTGAAGTGGTGAAATTGGCGGAAGGTTGTTCTTTCAGTGAGTATGATTCTATTTGTTCCTATATT
TATAGAAACAAAGAATCCTTTCATACTTTGGTGATAAATGGAGCTATAGTTGATAATTTGGTTGAAAAATTGCTGTACTC
AGTAAAACTTGATCACGGAAATATCATTGTAAAAGATGGTACAAAGATTTTCTTAAAAGAGCGTACAAAAAACCTTTTAC
AATTACGTAATATATCGTTACAAGTATATAATTCTTTGGAGTTAGTTGCTGTTACAGTCAATCCCTGGAGTTCTGATGGG
ACATATCTAAACTCCCAATTAATTATCGACCATCTAAAGGAGGATCTATCAGTACCGGTTTACGATTTATTGAGTTCCGA
GTACAAAAATCAAACTTAA

Upstream 100 bases:

>100_bases
TTGGCATGATTTTTGCAACATTTAATAAATGAAAACAAAGTCTAGAATTGTGACTATTTTAATAAAGACAAGAAAATAAG
AAAGGGGGCCAAAGGTAGAT

Downstream 100 bases:

>100_bases
ATAAATAACTTAAAAAGAAAGTAAAGGGGTGACGAAATATGGAGGCCAAATTAAAGGTCAATCAAGAGTTAGTTGACAAA
AGCAGAAAATATTCTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT
SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS
EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI
YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG
TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT

Sequences:

>Translated_352_residues
MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT
SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS
EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI
YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG
TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT
>Mature_352_residues
MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDAITRHKKPRVYIPPRTLFLTT
SEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCELVGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLS
EGFVLATGANIANTEELVAKKTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI
YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISLQVYNSLELVAVTVNPWSSDG
TYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39066; Mature: 39066

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDA
CCCHHHHHHHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHH
ITRHKKPRVYIPPRTLFLTTSEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCEL
HHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEE
VGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLSEGFVLATGANIANTEELVAK
EEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
KTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI
HHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH
YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISL
HCCCCCEEEEEEEHHHHHHHHHHHHHHEEECCCCEEEECCCEEEEHHHHHHHHHHHHCEE
QVYNSLELVAVTVNPWSSDGTYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT
EEECCEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNNKIIDSILNKSITTLAIIGMEKNTGKTVTLNTVISEAMNKDLRLALLSYGRDGEEVDA
CCCHHHHHHHCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCEEEEECCCCCCHHHHH
ITRHKKPRVYIPPRTLFLTTSEAANKSEITTKLVKELEYRTTMGRVGIYESGDYGGNCEL
HHHCCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEE
VGINSANQIYQVKKQLENQIDLLLIDGALDRKSSAMPSLSEGFVLATGANIANTEELVAK
EEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH
KTIIEIDKLTTPEINDEALQVKASQLLENGHTGVITKTGEVVKLAEGCSFSEYDSICSYI
HHHEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCHHHHHHHHHH
YRNKESFHTLVINGAIVDNLVEKLLYSVKLDHGNIIVKDGTKIFLKERTKNLLQLRNISL
HCCCCCEEEEEEEHHHHHHHHHHHHHHEEECCCCEEEECCCEEEEHHHHHHHHHHHHCEE
QVYNSLELVAVTVNPWSSDGTYLNSQLIIDHLKEDLSVPVYDLLSSEYKNQT
EEECCEEEEEEEECCCCCCCCEECHHHHHHHHHHHCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA