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The map label for this gene is 188586519

Identifier: 188586519

GI number: 188586519

Start: 1998951

End: 1999691

Strand: Reverse

Name: 188586519

Synonym: Nther_1905

Alternate gene names: NA

Gene position: 1999691-1998951 (Counterclockwise)

Preceding gene: 188586520

Following gene: 188586518

Centisome position: 63.17

GC content: 38.19

Gene sequence:

>741_bases
ATGAAACTGGATAAAACTGCAATCAAACCATATGGAGATTCTTTAAATGACGGTAAAGTGCAAATGAGTTTCACCTTGCC
ATTAGAGGCTAGCCCTGAAGCTAGGGAAGCTGCAAGAATTATGGCAAATAAAATGGGGCTTGATGAAGTAAATGTAGTAG
AAATGCAAGACTTGGGAGAAGGTTTTAGTTTCTTCGTTTTATACGGCAAAGCCGAAGCTACTGTAGATGCTACAAAAATT
AAGGTAGCCAAAGTAGAAACAGAGGCGATGGATTATTATGAAATCAATGACTACATTGAAGAAAATATTGGTAGAAAATT
AACAGTTGTTGGAGCTTGTACAGGCTCCGATGCTCATACTGTTGGTCTTGATGCTATTATGAACATGAAGGGATATGCCG
GGGAGTACGGTCTAGAAAGATACCCTCAATTTAACGCTCATAATATGGGCAGTCAGGTTCCAAATGAGGAATTGATTAAA
AAGGCAGTAGAAACTGAAGCTGATGCAATATTAGTTTCTCAGGTTGTAACACAACGTGAAATTCATGTTAAAAACCTAAC
TGAATTAGTAGAGCTCCTGGAAGCAGAAGGTTTGAGAGAAAAGTTTGTATTAATTGTCGGAGGACCTAGAATAACTCATG
AATTGGCATTAGAACTTGGATTTGACGCAGGTTTTGGTAAAGATACTTTACCCCCTGATGTTGCAACTTATATAGCTAAA
AAGGTTGCCGGGGAAATTTAG

Upstream 100 bases:

>100_bases
CGTCCTCAAACCGGAGGAAAGGGAGCAGATGGAGTAGTAACTAAGGAACAGGGTTATTATAATCCCTTCCTAGATCTTTT
AAGAAAGGGGTTGGGTATCA

Downstream 100 bases:

>100_bases
GAGGGAGGAATTTTCTGTGCCTCAAAAGGCAGATTTAGTAATTAATAATGCAAAGGTAATTACTTTAAATGATTCCCATG
ATATCGAGCAAGGAGTTACA

Product: beta-lysine 5,6-aminomutase beta subunit, D-lysine 5,6-aminomutase beta subunit

Products: (3S,5S)-3,5-diaminohexanoate

Alternate protein names: D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine; D-Lysine 56-Aminomutase Beta Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKLDKTAIKPYGDSLNDGKVQMSFTLPLEASPEAREAARIMANKMGLDEVNVVEMQDLGEGFSFFVLYGKAEATVDATKI
KVAKVETEAMDYYEINDYIEENIGRKLTVVGACTGSDAHTVGLDAIMNMKGYAGEYGLERYPQFNAHNMGSQVPNEELIK
KAVETEADAILVSQVVTQREIHVKNLTELVELLEAEGLREKFVLIVGGPRITHELALELGFDAGFGKDTLPPDVATYIAK
KVAGEI

Sequences:

>Translated_246_residues
MKLDKTAIKPYGDSLNDGKVQMSFTLPLEASPEAREAARIMANKMGLDEVNVVEMQDLGEGFSFFVLYGKAEATVDATKI
KVAKVETEAMDYYEINDYIEENIGRKLTVVGACTGSDAHTVGLDAIMNMKGYAGEYGLERYPQFNAHNMGSQVPNEELIK
KAVETEADAILVSQVVTQREIHVKNLTELVELLEAEGLREKFVLIVGGPRITHELALELGFDAGFGKDTLPPDVATYIAK
KVAGEI
>Mature_246_residues
MKLDKTAIKPYGDSLNDGKVQMSFTLPLEASPEAREAARIMANKMGLDEVNVVEMQDLGEGFSFFVLYGKAEATVDATKI
KVAKVETEAMDYYEINDYIEENIGRKLTVVGACTGSDAHTVGLDAIMNMKGYAGEYGLERYPQFNAHNMGSQVPNEELIK
KAVETEADAILVSQVVTQREIHVKNLTELVELLEAEGLREKFVLIVGGPRITHELALELGFDAGFGKDTLPPDVATYIAK
KVAGEI

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.3.3

Molecular weight: Translated: 26936; Mature: 26936

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKTAIKPYGDSLNDGKVQMSFTLPLEASPEAREAARIMANKMGLDEVNVVEMQDLGE
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHCCC
GFSFFVLYGKAEATVDATKIKVAKVETEAMDYYEINDYIEENIGRKLTVVGACTGSDAHT
CEEEEEEECCCCCEEEHHEEEEEEEEHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCH
VGLDAIMNMKGYAGEYGLERYPQFNAHNMGSQVPNEELIKKAVETEADAILVSQVVTQRE
HHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IHVKNLTELVELLEAEGLREKFVLIVGGPRITHELALELGFDAGFGKDTLPPDVATYIAK
HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KVAGEI
HHHCCC
>Mature Secondary Structure
MKLDKTAIKPYGDSLNDGKVQMSFTLPLEASPEAREAARIMANKMGLDEVNVVEMQDLGE
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEEHHHCCC
GFSFFVLYGKAEATVDATKIKVAKVETEAMDYYEINDYIEENIGRKLTVVGACTGSDAHT
CEEEEEEECCCCCEEEHHEEEEEEEEHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCH
VGLDAIMNMKGYAGEYGLERYPQFNAHNMGSQVPNEELIKKAVETEADAILVSQVVTQRE
HHHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IHVKNLTELVELLEAEGLREKFVLIVGGPRITHELALELGFDAGFGKDTLPPDVATYIAK
HHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
KVAGEI
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3S)-3,6-diaminohexanoate

Specific reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA