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The map label for this gene is etfB [H]

Identifier: 188586495

GI number: 188586495

Start: 1969455

End: 1970243

Strand: Reverse

Name: etfB [H]

Synonym: Nther_1880

Alternate gene names: 188586495

Gene position: 1970243-1969455 (Counterclockwise)

Preceding gene: 188586496

Following gene: 188586494

Centisome position: 62.24

GC content: 39.04

Gene sequence:

>789_bases
TTGAATATAATAGTTTGTGTAAAACAAGTGCCGGACACAAACGAAGTGAAGATAGACCCTGAAAAAGGAACCTTGATTAG
GGAAGGTGTACCGAGTATATTAAATCCCGATGATCAAAGTGCTTTAGAGGAAGCTCTTAGAATCAAGGATGAAAATACGG
ATACAAAAGTGACAGTCCTAACAATGGGACCACCCCAAGCAGAAGAAGTCCTAATAGAGGCAATTTCTATGGGAGCAGAC
GAAGGGGTATTATTATGTGATAAAGCCTTTGCCGGAGCAGATACTTGGGCTACTTCAAACACATTGGCAAAAGCCATCGA
GAACATTGGTGACTACGATCTAGTATTTTGTGGAAGACAGGCCATAGATGGTGACACGGCTCAAGTAGGTCCTCAGATAG
CAGAAAGATTAGGTCTCCCTCAGGTAACTTATGTAAAAGAATTTGATATCAAAGACGACAAAGTAACGGTAAAAAGAAGC
CTAGAAGATGGTTATGAAACCATTGAAGTTGAAAAACCAGCCCTGTTTACAGCAATTGAAGAACTAAACAAGCCGCGATA
TCCATACATTGACAAGATCTTTGACGCCTATAGAGAGAAAAAGATAAAGGTTTGGTCAAATGATGAACTGCAAATTGAAA
AGTCAGAACTAGGTTTAGACGGATCTCCAACTCAAGTAAAGAGAACCTTCACACCCGATAAGAAAAAAGAAGGAGAAATG
ATAGAAGGTTCACCTAGAGAACAGGCCAAGACTTTATTAGTAAAACTTAAAAGCAGAAATGTAATATAA

Upstream 100 bases:

>100_bases
CAAAGAATGGTAATTTCAGGAGATCTGTTAAAATAGCAAAAGTAAACAAGCTCACTACTAGTTTTCTAGTCTATAATAAG
TTGTCAAAGGAGGAATTAAA

Downstream 100 bases:

>100_bases
CGACAAGGGGGATTTAAGAATGGGTGTTAAAATATTAACAGATAAATGTAAGGGTTGTGCTTTATGTGTAGATGCATGTC
CCTTCGAAGCTATTGAGATG

Product: Electron transfer flavoprotein alpha/beta-subunit

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNIIVCVKQVPDTNEVKIDPEKGTLIREGVPSILNPDDQSALEEALRIKDENTDTKVTVLTMGPPQAEEVLIEAISMGAD
EGVLLCDKAFAGADTWATSNTLAKAIENIGDYDLVFCGRQAIDGDTAQVGPQIAERLGLPQVTYVKEFDIKDDKVTVKRS
LEDGYETIEVEKPALFTAIEELNKPRYPYIDKIFDAYREKKIKVWSNDELQIEKSELGLDGSPTQVKRTFTPDKKKEGEM
IEGSPREQAKTLLVKLKSRNVI

Sequences:

>Translated_262_residues
MNIIVCVKQVPDTNEVKIDPEKGTLIREGVPSILNPDDQSALEEALRIKDENTDTKVTVLTMGPPQAEEVLIEAISMGAD
EGVLLCDKAFAGADTWATSNTLAKAIENIGDYDLVFCGRQAIDGDTAQVGPQIAERLGLPQVTYVKEFDIKDDKVTVKRS
LEDGYETIEVEKPALFTAIEELNKPRYPYIDKIFDAYREKKIKVWSNDELQIEKSELGLDGSPTQVKRTFTPDKKKEGEM
IEGSPREQAKTLLVKLKSRNVI
>Mature_262_residues
MNIIVCVKQVPDTNEVKIDPEKGTLIREGVPSILNPDDQSALEEALRIKDENTDTKVTVLTMGPPQAEEVLIEAISMGAD
EGVLLCDKAFAGADTWATSNTLAKAIENIGDYDLVFCGRQAIDGDTAQVGPQIAERLGLPQVTYVKEFDIKDDKVTVKRS
LEDGYETIEVEKPALFTAIEELNKPRYPYIDKIFDAYREKKIKVWSNDELQIEKSELGLDGSPTQVKRTFTPDKKKEGEM
IEGSPREQAKTLLVKLKSRNVI

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=224, Percent_Identity=33.4821428571429, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI62420877, Length=210, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=2e-23,
Organism=Escherichia coli, GI87081682, Length=266, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI2367123, Length=217, Percent_Identity=29.4930875576037, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI25141345, Length=203, Percent_Identity=33.4975369458128, Blast_Score=114, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6321646, Length=206, Percent_Identity=30.0970873786408, Blast_Score=82, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24651147, Length=226, Percent_Identity=34.070796460177, Blast_Score=108, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24651145, Length=226, Percent_Identity=34.070796460177, Blast_Score=108, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29157; Mature: 29157

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIVCVKQVPDTNEVKIDPEKGTLIREGVPSILNPDDQSALEEALRIKDENTDTKVTVL
CCEEEEEECCCCCCCEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
TMGPPQAEEVLIEAISMGADEGVLLCDKAFAGADTWATSNTLAKAIENIGDYDLVFCGRQ
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCH
AIDGDTAQVGPQIAERLGLPQVTYVKEFDIKDDKVTVKRSLEDGYETIEVEKPALFTAIE
HCCCCHHHCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHH
ELNKPRYPYIDKIFDAYREKKIKVWSNDELQIEKSELGLDGSPTQVKRTFTPDKKKEGEM
HHCCCCCCHHHHHHHHHHHCEEEEECCCCEEEEHHHCCCCCCCCCEEECCCCCCCCCCCC
IEGSPREQAKTLLVKLKSRNVI
CCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNIIVCVKQVPDTNEVKIDPEKGTLIREGVPSILNPDDQSALEEALRIKDENTDTKVTVL
CCEEEEEECCCCCCCEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEE
TMGPPQAEEVLIEAISMGADEGVLLCDKAFAGADTWATSNTLAKAIENIGDYDLVFCGRQ
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCH
AIDGDTAQVGPQIAERLGLPQVTYVKEFDIKDDKVTVKRSLEDGYETIEVEKPALFTAIE
HCCCCHHHCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCHHHHHHH
ELNKPRYPYIDKIFDAYREKKIKVWSNDELQIEKSELGLDGSPTQVKRTFTPDKKKEGEM
HHCCCCCCHHHHHHHHHHHCEEEEECCCCEEEEHHHCCCCCCCCCEEECCCCCCCCCCCC
IEGSPREQAKTLLVKLKSRNVI
CCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA