Click here to switch to the map view.

The map label for this gene is 188586454

Identifier: 188586454

GI number: 188586454

Start: 1915496

End: 1915867

Strand: Reverse

Name: 188586454

Synonym: Nther_1839

Alternate gene names: NA

Gene position: 1915867-1915496 (Counterclockwise)

Preceding gene: 188586455

Following gene: 188586453

Centisome position: 60.52

GC content: 39.25

Gene sequence:

>372_bases
ATGCAAGTCGGTGACAGAAATGAAATAGTCAAGGAAGTAAGTAAAGAATTTTCAGCCAAGGAATTTGGAAGTGGTTCGGT
AGATGTTTTAGCCACACCTGCCATGATAGCCTTTATGGAGGAAGCTGCTTTAAAGCTTGTAGATTCTCAACTAGATGAAG
ACAGGGCTACGGTGGGTTCTTTAGTAAATGTTAAACACTTGGCGCCTACTCCTGTGGGAGATAAAGTTAAGGTTAATGCC
GTTCTCAAAGAAGTTGATGGTAAAAGATTGGTTTTTGAAGTAACTGCTCATGACAGCAACAATAAAATCGGGGAAGGTGA
GCATGAGCGTTTTATCATTAATCTATCCAAATTCATGAATAAACTGAGCTAA

Upstream 100 bases:

>100_bases
AAACCCTTCAGTATGGCAGAATTACATAAAGTATTACATTCAGTGATATGTTAAAATTGAATTTGATAAACTATCTTAAC
ATAAGGAGTGATAGACAGTT

Downstream 100 bases:

>100_bases
AATGAATAGCTAAAAGCTAAAACAAATATATGGAAATAAATACATTTACCTGCATTTCCTGTAAGAGAGGAAGTGCAGGT
TTTTTTATTTTTTCTTGAGT

Product: Thioesterase superfamily

Products: NA

Alternate protein names: Thioesterase; Thioesterase Family Protein; Dihydrolipoamide Acyltransferase; Thioesterase Superfamily; Dihydrolipoamide Acyltransferases; Thioesterase 4HBT Family; Thioesterase-Like Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQVGDRNEIVKEVSKEFSAKEFGSGSVDVLATPAMIAFMEEAALKLVDSQLDEDRATVGSLVNVKHLAPTPVGDKVKVNA
VLKEVDGKRLVFEVTAHDSNNKIGEGEHERFIINLSKFMNKLS

Sequences:

>Translated_123_residues
MQVGDRNEIVKEVSKEFSAKEFGSGSVDVLATPAMIAFMEEAALKLVDSQLDEDRATVGSLVNVKHLAPTPVGDKVKVNA
VLKEVDGKRLVFEVTAHDSNNKIGEGEHERFIINLSKFMNKLS
>Mature_123_residues
MQVGDRNEIVKEVSKEFSAKEFGSGSVDVLATPAMIAFMEEAALKLVDSQLDEDRATVGSLVNVKHLAPTPVGDKVKVNA
VLKEVDGKRLVFEVTAHDSNNKIGEGEHERFIINLSKFMNKLS

Specific function: Unknown

COG id: COG5496

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13456; Mature: 13456

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVGDRNEIVKEVSKEFSAKEFGSGSVDVLATPAMIAFMEEAALKLVDSQLDEDRATVGS
CCCCCHHHHHHHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVNVKHLAPTPVGDKVKVNAVLKEVDGKRLVFEVTAHDSNNKIGEGEHERFIINLSKFMN
HHCHHCCCCCCCCCCEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHH
KLS
HCC
>Mature Secondary Structure
MQVGDRNEIVKEVSKEFSAKEFGSGSVDVLATPAMIAFMEEAALKLVDSQLDEDRATVGS
CCCCCHHHHHHHHHHHHCHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
LVNVKHLAPTPVGDKVKVNAVLKEVDGKRLVFEVTAHDSNNKIGEGEHERFIINLSKFMN
HHCHHCCCCCCCCCCEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCEEEEEHHHHHH
KLS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA