Definition Natranaerobius thermophilus JW/NM-WN-LF, complete genome.
Accession NC_010718
Length 3,165,557

Click here to switch to the map view.

The map label for this gene is yheO [C]

Identifier: 188586418

GI number: 188586418

Start: 1867438

End: 1868103

Strand: Reverse

Name: yheO [C]

Synonym: Nther_1803

Alternate gene names: 188586418

Gene position: 1868103-1867438 (Counterclockwise)

Preceding gene: 188586419

Following gene: 188586417

Centisome position: 59.01

GC content: 31.83

Gene sequence:

>666_bases
ATGGAAGTAAATTACAATGAAATTTCAGAAAAGTTAAAACCCTTTTTGCCAATTGTCGAAGGTATTGCAACAACTTTCGG
TAAACATTGTGAAGTGGTTTTACATGATATTAATCAAGCTCATACGAGCATTGTGGCAATAGCTAATGGACATGTTACAA
GTCGGGGTATCGGTGGTCCACCTACAGACTATCTATCAGAAATACTTAATCAAGAAAAAGAAAAACGAGAACATAACAAT
AAACTTTTTAATTATAAAACGAGAAGTAAAGATGGCAAAGATTTAAAATCCACTACTATTTTATTGACCGATGAATGTAA
TGACCTGATCGGAGCTTTATGTATAAATATGGATCTAACGTCACCAAAAATGGCACTAACCTTTTTGGAAAATTTAATTC
AGATAGATAAAGAAGAAGAAAGAGAAAAATTCCCCGAAAATGTTAACGATTTTTTAAAGGTAATGATAGACAAAAGTATT
GGCTCTTTAGACAAACCTGTGAATCTGCTTTCAAAGGAAGAAAAGTTGGAAGTAATCCGTTATCTTGATCGCCATAGAAT
TTTCCAAATTAAAGGTTCAATTGATTTGCTAGCTAAAGAGTTAAATGTTTCTAGATATACAATTTACAATTATCTAGATG
AAGTGGCTGCCGAAAAAGAATTATGA

Upstream 100 bases:

>100_bases
CGTTGAATTACTAAAATTTTGTAAGCTTTGTTGACATTTTGGAAATGCTTTGGTATTATAAATTATAGTTATGATAGGAA
AGATATAGGAGGAAACTATT

Downstream 100 bases:

>100_bases
TAGTTGTTTGCTTAGCTAAGCCCTTGATAATAGGGTTTATATAATTAATACACTAAGGAGGTTATTTACATGTCAAGAGA
GTTTCAAGCAGAACCTTTCA

Product: YheO domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN
KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI
GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL

Sequences:

>Translated_221_residues
MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN
KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI
GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL
>Mature_221_residues
MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGPPTDYLSEILNQEKEKREHNN
KLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLTSPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSI
GSLDKPVNLLSKEEKLEVIRYLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL

Specific function: Unknown

COG id: COG2964

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yheO [H]

Homologues:

Organism=Escherichia coli, GI87082246, Length=205, Percent_Identity=31.219512195122, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013559
- ProDom:   PD037769 [H]

Pfam domain/function: PF08348 PAS_6 [H]

EC number: NA

Molecular weight: Translated: 25251; Mature: 25251

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCC
PTDYLSEILNQEKEKREHNNKLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLT
CHHHHHHHHHHHHHHHHHCCCEECEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
SPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSIGSLDKPVNLLSKEEKLEVIR
CHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL
HHHHHHEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEVNYNEISEKLKPFLPIVEGIATTFGKHCEVVLHDINQAHTSIVAIANGHVTSRGIGGP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEECCCCCCC
PTDYLSEILNQEKEKREHNNKLFNYKTRSKDGKDLKSTTILLTDECNDLIGALCINMDLT
CHHHHHHHHHHHHHHHHHCCCEECEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCC
SPKMALTFLENLIQIDKEEEREKFPENVNDFLKVMIDKSIGSLDKPVNLLSKEEKLEVIR
CHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
YLDRHRIFQIKGSIDLLAKELNVSRYTIYNYLDEVAAEKEL
HHHHHHEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]