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The map label for this gene is yrrO [H]

Identifier: 188586390

GI number: 188586390

Start: 1842184

End: 1843443

Strand: Reverse

Name: yrrO [H]

Synonym: Nther_1775

Alternate gene names: 188586390

Gene position: 1843443-1842184 (Counterclockwise)

Preceding gene: 188586391

Following gene: 188586389

Centisome position: 58.23

GC content: 35.63

Gene sequence:

>1260_bases
ATGACTATCGAATATAAAGGTAAATCTAAAGTTGAACAAAATCAAAATCCCTTAGAACTTTTAGCTCCTGCTGGCAATCT
AGAAAAACTTAAATTTGCTATTGATTACGGAGCAGATGCCGTATATTTAGGTGGGAAATCTTACGGATTAAGGGCTTTTG
CCGGTAATTTTTCAAGAGAGGATATGAGAGCGGGCGTTGATTATGCTCATTCGCGCGGTAGAAAGGTTTATATTACAGTT
AATATCTTTCCACACAACGAGGATTTAGAAGGTTTAGAAGAGTATTTAAAGGAATTACAATCAATAGGGGTAGATGCCAT
AATAATATCTGATCCTGGTATACTTAGAATCTGCAAAGAAACTGTACCAGAGATGGAAATTCACTTATCGACTCAAGCTA
ACTGTACAAACTGGAGATCTGCTAAATTTTGGAAAGATCAAGGTATAAATCGAATTATTCTAGCTCGAGAGCTAAGTTTA
GCGGAAATAGAACAAATTCATAGAATGGAATCTAATATAGAATTTGAAACTTTTGTCCACGGGGCAATGTGTATTTCGTA
CTCAGGTAGGTGCTTACTATCCAATTATTTGGCCAATAGAGATGCAAATAGAGGTGAATGCGCTCATCCTTGTAGATGGC
AGTATTATCTTATGGAACGTGAGCGTCCGGGGGAGTACCTGCCAATAACTGAAGATCAGGAAGGTACCAAAATTATGAGT
TCCAAAGATTTATGTATGATTAGGCATATTCCTGAACTTATAGATGCAGGGATTAAAAACTTCAAAATAGAAGGACGTAT
GAAGAGTGTACATTACGTTGCTACTGTAGTAAGAGCTTATCGAAAAGCTATTAATGCATATCTTTCCGATCCTGATAACT
ATAGTTTTAAAAGAGAATGGGAAGAAGAATTAAAGAAAGCTTCTACAAGACCTTTTAGTACTGGTTTTTATTTTGGCTCA
CCTGATGAAACTGATCAAGAATATACTAAAGAGCCAAGACAATCAAATCGCGATTTTGTGGGAATCGTTTTAAACAGTCA
AGATGGATATTTAACTATTCAGCAGAGGAATCATTTTCAAATTGGTGATCGCATAGAAATAATAGGACCTAACAAAACTT
ATGGTGAATTTGTCATAAACGAGATAATCAATAGTGAAGGTAAAAAAAGTCAAGCTGCTCCACATCCCAAAGAAGTTGTT
ACAGTTCCGTTGAATGTAGATTGTGAACCTAATTCATTGATACGTAAAATTCTGGGTTGA

Upstream 100 bases:

>100_bases
AGTAGAACTCATGTGTTTTCAGAAACGTATCAAGAACATTTGCAGGCTAAAGAAAGAGTTAGAGCTGATTAAATATATTA
TTGATGAAGGGAGGAAAAAA

Downstream 100 bases:

>100_bases
GTTTTAAAGCGGTTTTCGATATTATAAATTTAAGTCCGATTAGTTAATAGAAAGTGGTGATACTTTGGGAGCAGGAGTTA
CAGTGGCAGTCTTAGGGGGC

Product: peptidase U32

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTIEYKGKSKVEQNQNPLELLAPAGNLEKLKFAIDYGADAVYLGGKSYGLRAFAGNFSREDMRAGVDYAHSRGRKVYITV
NIFPHNEDLEGLEEYLKELQSIGVDAIIISDPGILRICKETVPEMEIHLSTQANCTNWRSAKFWKDQGINRIILARELSL
AEIEQIHRMESNIEFETFVHGAMCISYSGRCLLSNYLANRDANRGECAHPCRWQYYLMERERPGEYLPITEDQEGTKIMS
SKDLCMIRHIPELIDAGIKNFKIEGRMKSVHYVATVVRAYRKAINAYLSDPDNYSFKREWEEELKKASTRPFSTGFYFGS
PDETDQEYTKEPRQSNRDFVGIVLNSQDGYLTIQQRNHFQIGDRIEIIGPNKTYGEFVINEIINSEGKKSQAAPHPKEVV
TVPLNVDCEPNSLIRKILG

Sequences:

>Translated_419_residues
MTIEYKGKSKVEQNQNPLELLAPAGNLEKLKFAIDYGADAVYLGGKSYGLRAFAGNFSREDMRAGVDYAHSRGRKVYITV
NIFPHNEDLEGLEEYLKELQSIGVDAIIISDPGILRICKETVPEMEIHLSTQANCTNWRSAKFWKDQGINRIILARELSL
AEIEQIHRMESNIEFETFVHGAMCISYSGRCLLSNYLANRDANRGECAHPCRWQYYLMERERPGEYLPITEDQEGTKIMS
SKDLCMIRHIPELIDAGIKNFKIEGRMKSVHYVATVVRAYRKAINAYLSDPDNYSFKREWEEELKKASTRPFSTGFYFGS
PDETDQEYTKEPRQSNRDFVGIVLNSQDGYLTIQQRNHFQIGDRIEIIGPNKTYGEFVINEIINSEGKKSQAAPHPKEVV
TVPLNVDCEPNSLIRKILG
>Mature_418_residues
TIEYKGKSKVEQNQNPLELLAPAGNLEKLKFAIDYGADAVYLGGKSYGLRAFAGNFSREDMRAGVDYAHSRGRKVYITVN
IFPHNEDLEGLEEYLKELQSIGVDAIIISDPGILRICKETVPEMEIHLSTQANCTNWRSAKFWKDQGINRIILARELSLA
EIEQIHRMESNIEFETFVHGAMCISYSGRCLLSNYLANRDANRGECAHPCRWQYYLMERERPGEYLPITEDQEGTKIMSS
KDLCMIRHIPELIDAGIKNFKIEGRMKSVHYVATVVRAYRKAINAYLSDPDNYSFKREWEEELKKASTRPFSTGFYFGSP
DETDQEYTKEPRQSNRDFVGIVLNSQDGYLTIQQRNHFQIGDRIEIIGPNKTYGEFVINEIINSEGKKSQAAPHPKEVVT
VPLNVDCEPNSLIRKILG

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=445, Percent_Identity=37.9775280898876, Blast_Score=281, Evalue=7e-77,
Organism=Escherichia coli, GI87081910, Length=274, Percent_Identity=39.051094890511, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1789548, Length=317, Percent_Identity=33.4384858044164, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 47886; Mature: 47755

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIEYKGKSKVEQNQNPLELLAPAGNLEKLKFAIDYGADAVYLGGKSYGLRAFAGNFSRE
CEEEECCCCCHHCCCCCEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCCHH
DMRAGVDYAHSRGRKVYITVNIFPHNEDLEGLEEYLKELQSIGVDAIIISDPGILRICKE
HHHHCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
TVPEMEIHLSTQANCTNWRSAKFWKDQGINRIILARELSLAEIEQIHRMESNIEFETFVH
CCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHC
GAMCISYSGRCLLSNYLANRDANRGECAHPCRWQYYLMERERPGEYLPITEDQEGTKIMS
EEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECC
SKDLCMIRHIPELIDAGIKNFKIEGRMKSVHYVATVVRAYRKAINAYLSDPDNYSFKREW
CCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EEELKKASTRPFSTGFYFGSPDETDQEYTKEPRQSNRDFVGIVLNSQDGYLTIQQRNHFQ
HHHHHHHCCCCCCCCEECCCCCCCCHHHHHCHHHCCCCEEEEEEECCCCEEEEEECCCEE
IGDRIEIIGPNKTYGEFVINEIINSEGKKSQAAPHPKEVVTVPLNVDCEPNSLIRKILG
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC
>Mature Secondary Structure 
TIEYKGKSKVEQNQNPLELLAPAGNLEKLKFAIDYGADAVYLGGKSYGLRAFAGNFSRE
EEEECCCCCHHCCCCCEEEEECCCCCEEEEEEEECCCCEEEECCCCCCCEEECCCCCHH
DMRAGVDYAHSRGRKVYITVNIFPHNEDLEGLEEYLKELQSIGVDAIIISDPGILRICKE
HHHHCCHHHHCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
TVPEMEIHLSTQANCTNWRSAKFWKDQGINRIILARELSLAEIEQIHRMESNIEFETFVH
CCCCEEEEEECCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHC
GAMCISYSGRCLLSNYLANRDANRGECAHPCRWQYYLMERERPGEYLPITEDQEGTKIMS
EEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEECC
SKDLCMIRHIPELIDAGIKNFKIEGRMKSVHYVATVVRAYRKAINAYLSDPDNYSFKREW
CCCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EEELKKASTRPFSTGFYFGSPDETDQEYTKEPRQSNRDFVGIVLNSQDGYLTIQQRNHFQ
HHHHHHHCCCCCCCCEECCCCCCCCHHHHHCHHHCCCCEEEEEEECCCCEEEEEECCCEE
IGDRIEIIGPNKTYGEFVINEIINSEGKKSQAAPHPKEVVTVPLNVDCEPNSLIRKILG
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]