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The map label for this gene is nusB

Identifier: 188586319

GI number: 188586319

Start: 1777134

End: 1777553

Strand: Reverse

Name: nusB

Synonym: Nther_1702

Alternate gene names: 188586319

Gene position: 1777553-1777134 (Counterclockwise)

Preceding gene: 188586320

Following gene: 188586318

Centisome position: 56.15

GC content: 35.0

Gene sequence:

>420_bases
ATGAGTAGACGAACTGCTAGAGAGGCAAGTATGAAATTAGTATTCCAAATGGCATTTAATGATGATCATGTAGATGAAGT
AGGAGCGGAAGATATTCTGGCACAAGCCAAAGAAGAGCTTAACTATAATAACTATCAATACATAGAAACGGTAGTTTCTC
GTACTGAATCAAATTTACAAAAGATTGATGAGTACATCGAAAAGTTTTCTGAAAACTGGAAAATAGACCGATTGAGCAAG
GTTGATCTAAGTATATTGCGGTTAGCTATTAGTGAAATTTTATTTTTTGATGATATTCCCACTCGAGTTTCGATCAATGA
AGCTGTAGAACTAGCTAAAAAATTCAGTACAGATAAAGCCTCCGGGTATATTAATGGAATTCTTGACCAAGTTGCTAATC
AATTGAATAAGGCGCGGTGA

Upstream 100 bases:

>100_bases
CGTTTTTGGGATAAAGAAAAAAGATTACCAGATTCTATAGAAAAATTTTTGCCTCCCAGGAGATAAACTCTAGATAAAAG
ATGAAAAAGGGGAGTAAGGT

Downstream 100 bases:

>100_bases
TAGCCGATGGAACTGCTAATGGGTTTAGATACGAGTTGTTATACTACATCTATGGCGGTAATTAACAAGCAAGGAAAGAT
TATTGCAAAAACTGAACGCC

Product: NusB antitermination factor

Products: NA

Alternate protein names: Protein nusB

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSRRTAREASMKLVFQMAFNDDHVDEVGAEDILAQAKEELNYNNYQYIETVVSRTESNLQKIDEYIEKFSENWKIDRLSK
VDLSILRLAISEILFFDDIPTRVSINEAVELAKKFSTDKASGYINGILDQVANQLNKAR

Sequences:

>Translated_139_residues
MSRRTAREASMKLVFQMAFNDDHVDEVGAEDILAQAKEELNYNNYQYIETVVSRTESNLQKIDEYIEKFSENWKIDRLSK
VDLSILRLAISEILFFDDIPTRVSINEAVELAKKFSTDKASGYINGILDQVANQLNKAR
>Mature_138_residues
SRRTAREASMKLVFQMAFNDDHVDEVGAEDILAQAKEELNYNNYQYIETVVSRTESNLQKIDEYIEKFSENWKIDRLSKV
DLSILRLAISEILFFDDIPTRVSINEAVELAKKFSTDKASGYINGILDQVANQLNKAR

Specific function: Involved in the transcription termination process

COG id: COG0781

COG function: function code K; Transcription termination factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nusB family

Homologues:

None

Paralogues:

None

Copy number: 900 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NUSB_NATTJ (B2A534)

Other databases:

- EMBL:   CP001034
- RefSeq:   YP_001917864.1
- ProteinModelPortal:   B2A534
- SMR:   B2A534
- GeneID:   6317046
- GenomeReviews:   CP001034_GR
- KEGG:   nth:Nther_1702
- HOGENOM:   HBG734409
- OMA:   MELLFGM
- HAMAP:   MF_00073
- InterPro:   IPR011605
- InterPro:   IPR006027
- Gene3D:   G3DSA:1.10.940.10
- TIGRFAMs:   TIGR01951

Pfam domain/function: PF01029 NusB; SSF48013 NusB_RsmB_TIM44

EC number: NA

Molecular weight: Translated: 16012; Mature: 15881

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRTAREASMKLVFQMAFNDDHVDEVGAEDILAQAKEELNYNNYQYIETVVSRTESNLQ
CCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KIDEYIEKFSENWKIDRLSKVDLSILRLAISEILFFDDIPTRVSINEAVELAKKFSTDKA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH
SGYINGILDQVANQLNKAR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRRTAREASMKLVFQMAFNDDHVDEVGAEDILAQAKEELNYNNYQYIETVVSRTESNLQ
CCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
KIDEYIEKFSENWKIDRLSKVDLSILRLAISEILFFDDIPTRVSINEAVELAKKFSTDKA
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH
SGYINGILDQVANQLNKAR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA