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The map label for this gene is recN [H]

Identifier: 188586308

GI number: 188586308

Start: 1766310

End: 1767983

Strand: Reverse

Name: recN [H]

Synonym: Nther_1691

Alternate gene names: 188586308

Gene position: 1767983-1766310 (Counterclockwise)

Preceding gene: 188586309

Following gene: 188586307

Centisome position: 55.85

GC content: 33.27

Gene sequence:

>1674_bases
ATGCTAGTACATCTAAATATTAAAGATTTTGCCCTGATTGATCACCTTATCCTGGAGCCTGGTCCGGGATTAAATATTTT
AACTGGAGAAACTGGTGCAGGGAAAACAATAATTTTAGATGCCTTAGGACTTATCTTGGGAGGAAGAGCATCCACTGAAT
ACATTCGTACAGGGAGTAAAAAGGCTATTGTACAAGGGGTGTTTCAACTAAAATCAGGTCCCATTGATAATATCTTGGAA
GAATGGGGAATAGCCAAAGAAGATAACCAGCTTTTGATAATAACTAGAGAAATATCCCAAGGTAAGAGTATTGCAAAAAT
AAATGATCAAATAGTAACAGTCAATAAATTAAAAGAGTTAGGTAAACAGTTAGTAGATATTCATGGACAGCACGATCATC
AATCTTTATTAAATATTGATAAACATCTTGATCTTTTAGATGCATATGGTGGTTCAGAATTATTACAGCTAAGAGAAATG
ATTTCAGAACTCTATCAACAGCTCCAGCAAAACAAGCAGAAATTACAAGAGCTAATTCAAGATCCGAAAGAAAGAGCCCG
TAGATTAGAACTACTGGAATATCAACAAAGAGAAATTGAAGAAGCAAACCTGGATTCTAAAGAGGAACAAGAATTAATAG
AACAAAGAAATAAATTACAGAACATAGAAAGGTTAAGGGAAGCTGTCGGTTTTGCATATACCAGAATTTATGAAGGAGAA
GAATATCAGCCTTCGGTTATAGATTCCTTAGGCTCAGTCCTGGACAAGCTGAGAAATGCCGTTGATATAGACAACAAAAT
AGAAAATTTTTACCAACAAGTTGAACAAGAGATGATCAAAATTGAGGAACTAAGCCGAGATATTAATAACTATATTGAAG
AAATGGATATTAATCCTATGGAACTTCAAGAAATCGAAGATAGGATTAACACTTACAACGAGCTAAAACGAAAATATGGG
AATTCAATAGAAGAGATTATGAATTATCTAGAAGACATAGCTTCGGAAATTGATTACTTGAAAAACACTGAAAATCAGCG
TATTCAACTTGAACAAGAACAGCAACAAATAACAGATAAATTAAATAATTTATCGCAACAACTTCATAACAAAAGAATGG
AAGTAAAGCCTAACTTAGAAGAAAACATCATTTCTCAATTAAAGGATTTAGCCATGGATAAAGTTCAATTTAGTGTAGAT
CTTCAACAGACTAAACTTAATTCAAGAGGTTTTGATAAAGCTGAATTTTTATTTAGCCCCAATAAAGGTGAACCAGTAAA
ATCTCTTGTAAAAATAGCCTCTGGTGGTGAACTTGCTAGAGTTATGCTTGCTCTAAAATCAATATTTTCTGATATCGACA
ATATAAGCACTTTAGTTTTTGATGAGGTAGATACAGGCATTAGTGGGACTGCTGCTCAAAAAGTAGCGTATAAATTACAA
AGCTTGTCCGATAATACACAAATTTTATGCGTCACCCATTTACCACAAGTTGCTAGTAAAGCTGATGAACATTTTAAATT
ATCTAAATCAGATTATAATGGCCGAACTGCAACTGAAATAAACACTTTATCCCGTCAAGATAGAATTTTTGAGATAGCCA
AGATGATTGATGGAGAAGAACCATCAAAAACATCTTTAGAACATGCCGAAAACATGATTTTTGGGAGAGATTAA

Upstream 100 bases:

>100_bases
TTACGGCGAAGAAGTTTTTATCAGTTATTAAATGAAAAATTGACAGGAGGTCAAGAAGTATAATGATTAGGGAGCTGCTG
ATTAGAGAAGGAGGGCTCGA

Downstream 100 bases:

>100_bases
CACCATTATAAAATGGTGTTTTTTTTGTTAATGATACCTTGAGTTTCAGTTTATTCCCTAAAATAGCTACAGTATTAGAC
ATACTTATCGAGGGAAATTT

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MLVHLNIKDFALIDHLILEPGPGLNILTGETGAGKTIILDALGLILGGRASTEYIRTGSKKAIVQGVFQLKSGPIDNILE
EWGIAKEDNQLLIITREISQGKSIAKINDQIVTVNKLKELGKQLVDIHGQHDHQSLLNIDKHLDLLDAYGGSELLQLREM
ISELYQQLQQNKQKLQELIQDPKERARRLELLEYQQREIEEANLDSKEEQELIEQRNKLQNIERLREAVGFAYTRIYEGE
EYQPSVIDSLGSVLDKLRNAVDIDNKIENFYQQVEQEMIKIEELSRDINNYIEEMDINPMELQEIEDRINTYNELKRKYG
NSIEEIMNYLEDIASEIDYLKNTENQRIQLEQEQQQITDKLNNLSQQLHNKRMEVKPNLEENIISQLKDLAMDKVQFSVD
LQQTKLNSRGFDKAEFLFSPNKGEPVKSLVKIASGGELARVMLALKSIFSDIDNISTLVFDEVDTGISGTAAQKVAYKLQ
SLSDNTQILCVTHLPQVASKADEHFKLSKSDYNGRTATEINTLSRQDRIFEIAKMIDGEEPSKTSLEHAENMIFGRD

Sequences:

>Translated_557_residues
MLVHLNIKDFALIDHLILEPGPGLNILTGETGAGKTIILDALGLILGGRASTEYIRTGSKKAIVQGVFQLKSGPIDNILE
EWGIAKEDNQLLIITREISQGKSIAKINDQIVTVNKLKELGKQLVDIHGQHDHQSLLNIDKHLDLLDAYGGSELLQLREM
ISELYQQLQQNKQKLQELIQDPKERARRLELLEYQQREIEEANLDSKEEQELIEQRNKLQNIERLREAVGFAYTRIYEGE
EYQPSVIDSLGSVLDKLRNAVDIDNKIENFYQQVEQEMIKIEELSRDINNYIEEMDINPMELQEIEDRINTYNELKRKYG
NSIEEIMNYLEDIASEIDYLKNTENQRIQLEQEQQQITDKLNNLSQQLHNKRMEVKPNLEENIISQLKDLAMDKVQFSVD
LQQTKLNSRGFDKAEFLFSPNKGEPVKSLVKIASGGELARVMLALKSIFSDIDNISTLVFDEVDTGISGTAAQKVAYKLQ
SLSDNTQILCVTHLPQVASKADEHFKLSKSDYNGRTATEINTLSRQDRIFEIAKMIDGEEPSKTSLEHAENMIFGRD
>Mature_557_residues
MLVHLNIKDFALIDHLILEPGPGLNILTGETGAGKTIILDALGLILGGRASTEYIRTGSKKAIVQGVFQLKSGPIDNILE
EWGIAKEDNQLLIITREISQGKSIAKINDQIVTVNKLKELGKQLVDIHGQHDHQSLLNIDKHLDLLDAYGGSELLQLREM
ISELYQQLQQNKQKLQELIQDPKERARRLELLEYQQREIEEANLDSKEEQELIEQRNKLQNIERLREAVGFAYTRIYEGE
EYQPSVIDSLGSVLDKLRNAVDIDNKIENFYQQVEQEMIKIEELSRDINNYIEEMDINPMELQEIEDRINTYNELKRKYG
NSIEEIMNYLEDIASEIDYLKNTENQRIQLEQEQQQITDKLNNLSQQLHNKRMEVKPNLEENIISQLKDLAMDKVQFSVD
LQQTKLNSRGFDKAEFLFSPNKGEPVKSLVKIASGGELARVMLALKSIFSDIDNISTLVFDEVDTGISGTAAQKVAYKLQ
SLSDNTQILCVTHLPQVASKADEHFKLSKSDYNGRTATEINTLSRQDRIFEIAKMIDGEEPSKTSLEHAENMIFGRD

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=561, Percent_Identity=33.5115864527629, Blast_Score=295, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 63636; Mature: 63636

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVHLNIKDFALIDHLILEPGPGLNILTGETGAGKTIILDALGLILGGRASTEYIRTGSK
CEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
KAIVQGVFQLKSGPIDNILEEWGIAKEDNQLLIITREISQGKSIAKINDQIVTVNKLKEL
HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEHHHHHHH
GKQLVDIHGQHDHQSLLNIDKHLDLLDAYGGSELLQLREMISELYQQLQQNKQKLQELIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPKERARRLELLEYQQREIEEANLDSKEEQELIEQRNKLQNIERLREAVGFAYTRIYEGE
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
EYQPSVIDSLGSVLDKLRNAVDIDNKIENFYQQVEQEMIKIEELSRDINNYIEEMDINPM
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELQEIEDRINTYNELKRKYGNSIEEIMNYLEDIASEIDYLKNTENQRIQLEQEQQQITDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
LNNLSQQLHNKRMEVKPNLEENIISQLKDLAMDKVQFSVDLQQTKLNSRGFDKAEFLFSP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
NKGEPVKSLVKIASGGELARVMLALKSIFSDIDNISTLVFDEVDTGISGTAAQKVAYKLQ
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SLSDNTQILCVTHLPQVASKADEHFKLSKSDYNGRTATEINTLSRQDRIFEIAKMIDGEE
HCCCCCEEEEEECCHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PSKTSLEHAENMIFGRD
CCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLVHLNIKDFALIDHLILEPGPGLNILTGETGAGKTIILDALGLILGGRASTEYIRTGSK
CEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
KAIVQGVFQLKSGPIDNILEEWGIAKEDNQLLIITREISQGKSIAKINDQIVTVNKLKEL
HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCHHHCCCEEEHHHHHHH
GKQLVDIHGQHDHQSLLNIDKHLDLLDAYGGSELLQLREMISELYQQLQQNKQKLQELIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPKERARRLELLEYQQREIEEANLDSKEEQELIEQRNKLQNIERLREAVGFAYTRIYEGE
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
EYQPSVIDSLGSVLDKLRNAVDIDNKIENFYQQVEQEMIKIEELSRDINNYIEEMDINPM
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELQEIEDRINTYNELKRKYGNSIEEIMNYLEDIASEIDYLKNTENQRIQLEQEQQQITDK
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHH
LNNLSQQLHNKRMEVKPNLEENIISQLKDLAMDKVQFSVDLQQTKLNSRGFDKAEFLFSP
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEECC
NKGEPVKSLVKIASGGELARVMLALKSIFSDIDNISTLVFDEVDTGISGTAAQKVAYKLQ
CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SLSDNTQILCVTHLPQVASKADEHFKLSKSDYNGRTATEINTLSRQDRIFEIAKMIDGEE
HCCCCCEEEEEECCHHHHHCCHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PSKTSLEHAENMIFGRD
CCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]