| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is 188586248
Identifier: 188586248
GI number: 188586248
Start: 1711763
End: 1713127
Strand: Reverse
Name: 188586248
Synonym: Nther_1631
Alternate gene names: NA
Gene position: 1713127-1711763 (Counterclockwise)
Preceding gene: 188586249
Following gene: 188586247
Centisome position: 54.12
GC content: 33.26
Gene sequence:
>1365_bases ATGAGTAATGACACTACGAAAAAACATATAATCTCAGAAGTTTGGAATGAGTCAATAGCTAAAGAAGTTGGAATCAAACC TGGAGATGCACTGATAAGTATTAATGAATGCGAAATTAAAGATATTTTAGATTATTATTTTTTGACTAGTGATGATTTTA TTGAAATTTTAATTGAAAAAGATTCAGGTGAAAATTGGTTAATTGAAATAGATAAGGAGTTTGACGAGCCATTAGGATTA ATTTTTGATTCTCCGACTATCTCGCCAATAAAGAACTGCCAGAATAACTGTATTTTTTGTTTTGTAAATCAGCTACCCAG TGGTATGCGTAAAAGTTTATATGTCAAAGATGATGATTACAGATTGAGCCCTTTTCATGGCAATTATATAACTTTGACAA ATATTAATGAAACGGAATTAGAAAGACTTGTTAACTATAGGATATCACCTATGTTTATATCTGTTCATACTACCAACCCT GAGTTAAGGCAGTATATGCTTAACAATCCTAGAGCATCTCAAATTAATAATTATCTATCCAAACTCAAAAATGCTGGCAT TGAAATACACGGGCAGATTGTAATGTGTCCTGGTGTTAATGATGGAAAAGAGCTTGAGAAAACAATAGTAGATTTATCAA ACTATTATCCTGAATTTCAAAGCCTAGCAGTAGTACCTGTAGGTTTAACAAAGCATAGAGAGGGAAATACTACTTTAAGG CCTGTAACATCCGAACAGTCACAAGAAGTTATCCAACAAGTTGAAGCCCTGCAAAACCAATTACTAATGAATCTAGGCAC TCGATTTGTATTTTTAGCAGACGAGTTCTATTTAATGGCAGGACATGAATTACCATCAAATCAAGATTATGAAAATTTTC CGCAAATTGATAATGGTGTAGGATTGATAAGAAAATTTGAACAGGAAGTTAGAGAATCATTAAACAGTCTAACTTGCCAG GATAACATGAAAGTTAAAGAAACTGTCACAGGCACTGTTGTCACAGGAGAACTAGGTGAACAGATTATGCAAAATATTAT CACACAAATTGAAAACAGCTGGGGAGAAACAAGCCTTAAAATTATCCCCATCAATAATAACTTTTTTGGTCCCCAGGTAA CTGTGGCTGGACTAGTAACAGGCAGGGATATAATTGATCAAATTAAACCCAAGTTAGAAAAAGGGGAGATACAAACACCA TTATTGATACCTAATGTTATGTTAAAGGACGGAGAAAATGTTTTTTTAGATGATTTGTCTATTGAGGCCCTGGAAACAGA GCTAGATATTAAAACTATAATTGTTCCTGTTAACGGTGAAAAATTTGTAAAGACCCTAAGAGATTTTTACTATACTGGCC TCTAG
Upstream 100 bases:
>100_bases CACAATTTTAATTGTAGGATAATCTAATATAGCTTACTGACAGTTGATGGCAAATATAAAATAAAATTTACAAGAATAAG AAGGTTGAAGGTGATAATAT
Downstream 100 bases:
>100_bases AAGGAGTTGATAAAAATGTCAGTAAAAGCTACAGTAGCTTTAGTAGGAAGACCTAATGTAGGTAAATCTGCTCTATTTAA TAGAATTGTTGGTCAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSNDTTKKHIISEVWNESIAKEVGIKPGDALISINECEIKDILDYYFLTSDDFIEILIEKDSGENWLIEIDKEFDEPLGL IFDSPTISPIKNCQNNCIFCFVNQLPSGMRKSLYVKDDDYRLSPFHGNYITLTNINETELERLVNYRISPMFISVHTTNP ELRQYMLNNPRASQINNYLSKLKNAGIEIHGQIVMCPGVNDGKELEKTIVDLSNYYPEFQSLAVVPVGLTKHREGNTTLR PVTSEQSQEVIQQVEALQNQLLMNLGTRFVFLADEFYLMAGHELPSNQDYENFPQIDNGVGLIRKFEQEVRESLNSLTCQ DNMKVKETVTGTVVTGELGEQIMQNIITQIENSWGETSLKIIPINNNFFGPQVTVAGLVTGRDIIDQIKPKLEKGEIQTP LLIPNVMLKDGENVFLDDLSIEALETELDIKTIIVPVNGEKFVKTLRDFYYTGL
Sequences:
>Translated_454_residues MSNDTTKKHIISEVWNESIAKEVGIKPGDALISINECEIKDILDYYFLTSDDFIEILIEKDSGENWLIEIDKEFDEPLGL IFDSPTISPIKNCQNNCIFCFVNQLPSGMRKSLYVKDDDYRLSPFHGNYITLTNINETELERLVNYRISPMFISVHTTNP ELRQYMLNNPRASQINNYLSKLKNAGIEIHGQIVMCPGVNDGKELEKTIVDLSNYYPEFQSLAVVPVGLTKHREGNTTLR PVTSEQSQEVIQQVEALQNQLLMNLGTRFVFLADEFYLMAGHELPSNQDYENFPQIDNGVGLIRKFEQEVRESLNSLTCQ DNMKVKETVTGTVVTGELGEQIMQNIITQIENSWGETSLKIIPINNNFFGPQVTVAGLVTGRDIIDQIKPKLEKGEIQTP LLIPNVMLKDGENVFLDDLSIEALETELDIKTIIVPVNGEKFVKTLRDFYYTGL >Mature_453_residues SNDTTKKHIISEVWNESIAKEVGIKPGDALISINECEIKDILDYYFLTSDDFIEILIEKDSGENWLIEIDKEFDEPLGLI FDSPTISPIKNCQNNCIFCFVNQLPSGMRKSLYVKDDDYRLSPFHGNYITLTNINETELERLVNYRISPMFISVHTTNPE LRQYMLNNPRASQINNYLSKLKNAGIEIHGQIVMCPGVNDGKELEKTIVDLSNYYPEFQSLAVVPVGLTKHREGNTTLRP VTSEQSQEVIQQVEALQNQLLMNLGTRFVFLADEFYLMAGHELPSNQDYENFPQIDNGVGLIRKFEQEVRESLNSLTCQD NMKVKETVTGTVVTGELGEQIMQNIITQIENSWGETSLKIIPINNNFFGPQVTVAGLVTGRDIIDQIKPKLEKGEIQTPL LIPNVMLKDGENVFLDDLSIEALETELDIKTIIVPVNGEKFVKTLRDFYYTGL
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51545; Mature: 51414
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDTTKKHIISEVWNESIAKEVGIKPGDALISINECEIKDILDYYFLTSDDFIEILIEK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEEC DSGENWLIEIDKEFDEPLGLIFDSPTISPIKNCQNNCIFCFVNQLPSGMRKSLYVKDDDY CCCCEEEEEECCCCCCCCCEEECCCCCCHHHHCCCCEEEEEHHHCCCCHHHCEEEECCCE RLSPFHGNYITLTNINETELERLVNYRISPMFISVHTTNPELRQYMLNNPRASQINNYLS EECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHH KLKNAGIEIHGQIVMCPGVNDGKELEKTIVDLSNYYPEFQSLAVVPVGLTKHREGNTTLR HHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCCEEC PVTSEQSQEVIQQVEALQNQLLMNLGTRFVFLADEFYLMAGHELPSNQDYENFPQIDNGV CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCH GLIRKFEQEVRESLNSLTCQDNMKVKETVTGTVVTGELGEQIMQNIITQIENSWGETSLK HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEE IIPINNNFFGPQVTVAGLVTGRDIIDQIKPKLEKGEIQTPLLIPNVMLKDGENVFLDDLS EEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCEECCCCEEECCCEEEEECCC IEALETELDIKTIIVPVNGEKFVKTLRDFYYTGL HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCC >Mature Secondary Structure SNDTTKKHIISEVWNESIAKEVGIKPGDALISINECEIKDILDYYFLTSDDFIEILIEK CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEEEC DSGENWLIEIDKEFDEPLGLIFDSPTISPIKNCQNNCIFCFVNQLPSGMRKSLYVKDDDY CCCCEEEEEECCCCCCCCCEEECCCCCCHHHHCCCCEEEEEHHHCCCCHHHCEEEECCCE RLSPFHGNYITLTNINETELERLVNYRISPMFISVHTTNPELRQYMLNNPRASQINNYLS EECCCCCCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHH KLKNAGIEIHGQIVMCPGVNDGKELEKTIVDLSNYYPEFQSLAVVPVGLTKHREGNTTLR HHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCEECCCCCCEEC PVTSEQSQEVIQQVEALQNQLLMNLGTRFVFLADEFYLMAGHELPSNQDYENFPQIDNGV CCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCH GLIRKFEQEVRESLNSLTCQDNMKVKETVTGTVVTGELGEQIMQNIITQIENSWGETSLK HHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCEEE IIPINNNFFGPQVTVAGLVTGRDIIDQIKPKLEKGEIQTPLLIPNVMLKDGENVFLDDLS EEEECCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCCCCEECCCCEEECCCEEEEECCC IEALETELDIKTIIVPVNGEKFVKTLRDFYYTGL HHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA