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The map label for this gene is recO [H]

Identifier: 188585832

GI number: 188585832

Start: 1275123

End: 1275896

Strand: Direct

Name: recO [H]

Synonym: Nther_1206

Alternate gene names: 188585832

Gene position: 1275123-1275896 (Clockwise)

Preceding gene: 188585831

Following gene: 188585833

Centisome position: 40.28

GC content: 35.14

Gene sequence:

>774_bases
ATGTGTGCTCTGTATAATTCGGATGCGGTGGTTATTAGAAGCCGTGATTATAGAGATTATGACAAGATAATAAATCTGTT
CACCCCTTATTATGGAAGAGTGTCTGCAGTTGTGAAAGGTGTTAAAAAACCTAAAAGCAAATTAGCAGGTATTGTACAAA
GTTTTACTTACGGAAATTATCAACTTTACTCAGGAAAAAGCCTTGGTCGGCTAGTTCAAGGAAAGGTATTACATGGGTTT
CAAGAATTGAGAACAGACCTAGTATTAATGAGTGCAGGTATGTGTATTTTAGAACTAATTGATAAAGCAATTCCAGAAGG
TGAGGAGTACCCGGCTTTATTTGGAGTGACATTAAGTTGTTTTCATCTATTAGAAAAAAGTTACCCTCCTTCCCTGGTAT
TACGTATATTTGAAGCTAAATTGATACATAATTTAGGAGTGAGTCCAGAATTATCAGGATGTATCAATCATGGCAGTATT
ACCCAAGGGAATTTGTATTTTGATCCTGAAACTGGAGGATTGATTTGTGAAACCTGTTTTGAACAGTTAACAGAGAACCG
GGGACCAGGGAGAGCCTTTCCTGTAGAAAAAGGAAGTATTAATATAATAAAACGTATGTTTGAATTTCCTGTATATAAAC
TGCGAACACTAAAACCGACTCAATTACAGTATGATACTTTGGAGAAAATGTTAACAAGCATGCTCGAAGTTCATTTTGGG
ATTGTATGTAAAACTAAGCCTTTTTTTAAGACCAATCTACAGAGAAATAGTTAA

Upstream 100 bases:

>100_bases
AGAATTTATTAGGTTCTCAGATATACTTAGATTTATGGGTTAAAAATCAAAAAGATTGGCGAAACAGAGAAAGATTTTTA
AGAGAGTTGGGGTATTAAAG

Downstream 100 bases:

>100_bases
ACATATGATGGATGATTTGATAAAATAAGGAATACTTTAACAGTTTTAGTTGACATGACCTGGGGTTTTTGCTATATTTT
CCTTATAGTATAAAAAATAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MCALYNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYSGKSLGRLVQGKVLHGF
QELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSCFHLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSI
TQGNLYFDPETGGLICETCFEQLTENRGPGRAFPVEKGSINIIKRMFEFPVYKLRTLKPTQLQYDTLEKMLTSMLEVHFG
IVCKTKPFFKTNLQRNS

Sequences:

>Translated_257_residues
MCALYNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYSGKSLGRLVQGKVLHGF
QELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSCFHLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSI
TQGNLYFDPETGGLICETCFEQLTENRGPGRAFPVEKGSINIIKRMFEFPVYKLRTLKPTQLQYDTLEKMLTSMLEVHFG
IVCKTKPFFKTNLQRNS
>Mature_257_residues
MCALYNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNYQLYSGKSLGRLVQGKVLHGF
QELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSCFHLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSI
TQGNLYFDPETGGLICETCFEQLTENRGPGRAFPVEKGSINIIKRMFEFPVYKLRTLKPTQLQYDTLEKMLTSMLEVHFG
IVCKTKPFFKTNLQRNS

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28985; Mature: 28985

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCALYNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNY
CCEEECCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
QLYSGKSLGRLVQGKVLHGFQELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSC
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
FHLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSITQGNLYFDPETGGLICETCF
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHH
EQLTENRGPGRAFPVEKGSINIIKRMFEFPVYKLRTLKPTQLQYDTLEKMLTSMLEVHFG
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IVCKTKPFFKTNLQRNS
EEECCCCHHHCCCCCCC
>Mature Secondary Structure
MCALYNSDAVVIRSRDYRDYDKIINLFTPYYGRVSAVVKGVKKPKSKLAGIVQSFTYGNY
CCEEECCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
QLYSGKSLGRLVQGKVLHGFQELRTDLVLMSAGMCILELIDKAIPEGEEYPALFGVTLSC
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHH
FHLLEKSYPPSLVLRIFEAKLIHNLGVSPELSGCINHGSITQGNLYFDPETGGLICETCF
HHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHH
EQLTENRGPGRAFPVEKGSINIIKRMFEFPVYKLRTLKPTQLQYDTLEKMLTSMLEVHFG
HHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC
IVCKTKPFFKTNLQRNS
EEECCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA