| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
Click here to switch to the map view.
The map label for this gene is abgA [C]
Identifier: 188585785
GI number: 188585785
Start: 1227213
End: 1227728
Strand: Direct
Name: abgA [C]
Synonym: Nther_1159
Alternate gene names: 188585785
Gene position: 1227213-1227728 (Clockwise)
Preceding gene: 188585782
Following gene: 188585786
Centisome position: 38.77
GC content: 39.53
Gene sequence:
>516_bases ATGCATGCATGTGCCCATGATGGCCATATGGCCATGTTATTGGTAGCAGCCAAAATTTTAAGTCAACAAAAAGAGAAACT TAAAGGAAATATAAAATTTGTATTTCAGCCCAATGAAGAAAACGCTGGTGCAAGGTTAATGGTTGAAGAAGGTGTATTGG AAAATCCCAAAGTGGATGCTTGTGTTAACTGGAACAGAAGAGCATGGAGGGGATTATCTGCTATAGTTCCTCTTATGCCT TCAGGAGAAAATACTGGCGCATGTCACTTGACCTGGACAGATAGGAAATATCAAGAAAACGATGCAATTATTTTGGAACT ATCTGGTTGCTATCGCAGGTATCATTCACCTATGGCTAGAACTATATTCTTGGGAGATAATCCACCTCAAGAGCTTCAAA GAATGGCTGATATTGTAGCAGAAGGGGTTAACACAACTTTAGAATTTATCAAACCAGGTGTAACTTGTGAGGAAATTGAA GCAACTTGGGCTGGTGTGCTAAAAAATACGGCTTGA
Upstream 100 bases:
>100_bases CTCAGCACAATAGATTATCTTTTGTGGCACAGTTGTTACATTACCTGACAGTGACGTATTATAGAATGAAGTAGCTTATA AATCAAAAAATGATGGTGTT
Downstream 100 bases:
>100_bases ACAAAGAATCCCGTATTGGTTACTCTGTTGGTCTTAATTATCCACCAGATTGGGAGAGCATACAATCAGCTTGCGACCAG GAGATAAAACTGTACTTCAA
Product: peptidase M20
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MHACAHDGHMAMLLVAAKILSQQKEKLKGNIKFVFQPNEENAGARLMVEEGVLENPKVDACVNWNRRAWRGLSAIVPLMP SGENTGACHLTWTDRKYQENDAIILELSGCYRRYHSPMARTIFLGDNPPQELQRMADIVAEGVNTTLEFIKPGVTCEEIE ATWAGVLKNTA
Sequences:
>Translated_171_residues MHACAHDGHMAMLLVAAKILSQQKEKLKGNIKFVFQPNEENAGARLMVEEGVLENPKVDACVNWNRRAWRGLSAIVPLMP SGENTGACHLTWTDRKYQENDAIILELSGCYRRYHSPMARTIFLGDNPPQELQRMADIVAEGVNTTLEFIKPGVTCEEIE ATWAGVLKNTA >Mature_171_residues MHACAHDGHMAMLLVAAKILSQQKEKLKGNIKFVFQPNEENAGARLMVEEGVLENPKVDACVNWNRRAWRGLSAIVPLMP SGENTGACHLTWTDRKYQENDAIILELSGCYRRYHSPMARTIFLGDNPPQELQRMADIVAEGVNTTLEFIKPGVTCEEIE ATWAGVLKNTA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR000994 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: NA
Molecular weight: Translated: 19064; Mature: 19064
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHACAHDGHMAMLLVAAKILSQQKEKLKGNIKFVFQPNEENAGARLMVEEGVLENPKVDA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCE CVNWNRRAWRGLSAIVPLMPSGENTGACHLTWTDRKYQENDAIILELSGCYRRYHSPMAR EECCCHHHHHCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCEE TIFLGDNPPQELQRMADIVAEGVNTTLEFIKPGVTCEEIEATWAGVLKNTA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MHACAHDGHMAMLLVAAKILSQQKEKLKGNIKFVFQPNEENAGARLMVEEGVLENPKVDA CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCE CVNWNRRAWRGLSAIVPLMPSGENTGACHLTWTDRKYQENDAIILELSGCYRRYHSPMAR EECCCHHHHHCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHHHHCCCCEE TIFLGDNPPQELQRMADIVAEGVNTTLEFIKPGVTCEEIEATWAGVLKNTA EEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]