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The map label for this gene is yaaJ [C]

Identifier: 188585782

GI number: 188585782

Start: 1224250

End: 1225620

Strand: Direct

Name: yaaJ [C]

Synonym: Nther_1156

Alternate gene names: 188585782

Gene position: 1224250-1225620 (Clockwise)

Preceding gene: 188585781

Following gene: 188585785

Centisome position: 38.67

GC content: 37.64

Gene sequence:

>1371_bases
ATGGACTCGTTAAGTGTTATCGAAAGTATTAATAATGTGTTATGGGGACCGGTTATGTTAGTACTGTTGTTAGGTACGGG
TGTTTTATTTACTATTAAGCTTAGGTTTATTCAGTTGCGGCGGCTAAAAGATACTGTAAGAGAGACTTTTAAAAAGAATG
AAGGCGTCAAAGCGGATGACGAAGGCATGAGTTCTTTTCAAGCGTTGGCAACTGCCATTGCTGCACAAGTGGGTACTGGT
AACCTGGCAGGAGTGGCTACGGCAATAGCAGCGGGGGGACCTGGAGCCGTATTTTGGATGTGGATTAGTGGTTTCTTTGG
TATGGGGACTATTTTTGCAGAAGCTGTGATATCACAGGTATATACTGAAAAAGTTGGCGGACGGGTTGTAGGAGGGCCAG
CTTACTATATAAAACATGGTTTGGGTAGTAAAGCTTTAGCTGGTTTTTTTGCTGTAGCAATTGTTTTGGCTTTAGGATTC
ATGGGAAATATGGTGCAATCTAATTCCATCGCTGATGCTGTAAATAGTGCTTTTCAAATTCCCCCCTTAGTGACTGGATT
AGTTATTGCTTTTTTAGTGGGTCTGATAGTAATTGGAGGAATGAGTCGAATTGCCCACTTCACTTCAAATGTAGTTCCAA
TTATGGCGGTGTTTTATCTATTTGGAGCCTTTGTGATTATACTAACAAACTATCAAGAAATTATACCAGCTATCAAAATG
ATTGTCTACGGAGCTTTTAATCCAGCTGCTGCTACTGGAGGTATTATAGGAGTAACTATTAGAGAAGTGTTCCGTTATGG
GATTGCTAGAGGGTTATTTTCTAATGAAGCAGGAATGGGTTCAACTCCTCATGCACACGCAGTAGCTAAAGTAAAGCATC
CCGCTCAACAGGGCCTTGTAGGTATCTTTGGCGTATTATTTGACACTTTGATTGTTTGTACTGTTACAGCCCTTGTTATT
ATCATAACAGAAGCTTATACTACTGATTTAGTTGGTATTGAATTGACACAATATGGTTTTTATGAAGGGTTTGGAGAATT
GGGAAACTCATTTATTGCAATTAGTATGTTTTTCTTTGCATTATCTACTATTATCAGTTGGTATTTCTTTGCAGAGGCTA
ATATTAGATATTTGTTCGGTACAAAGTTTTTGAGAGTTTTTCAAGGTTTAGTACTAATTTTTGTGGTTATCGGTACAAGT
TTAGAAGTGACGGTAGTCTGGGAACTCGCCGATACTTTTAACGGTTTGATGGTAATTCCTAACTTGATTGCTTTATTGGG
TATGGTATCTTTAGTAGTTAAGATATTAAATGATTATGAGAACAATTATGAAGAAGATAAATCTTCAACTTTTGAAAAAG
AAATTAAGTAA

Upstream 100 bases:

>100_bases
TCAATACTTTAATAAAGGAATTTTTTATAGAAGATTTCTCATTAAAGTTATTGATTCTACAACACATAAACAAGGAAAAA
ATTTTAATTGGGAGGGAATT

Downstream 100 bases:

>100_bases
TACTTAGTCGATCCTTTTATGTTATTTGCCAATGATGTGTAGTCTCTTGTTGTGTAGTAATGTTCATGAAAATTAGTAGC
TATAATGGCACGGTAAGATG

Product: amino acid carrier protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 456; Mature: 456

Protein sequence:

>456_residues
MDSLSVIESINNVLWGPVMLVLLLGTGVLFTIKLRFIQLRRLKDTVRETFKKNEGVKADDEGMSSFQALATAIAAQVGTG
NLAGVATAIAAGGPGAVFWMWISGFFGMGTIFAEAVISQVYTEKVGGRVVGGPAYYIKHGLGSKALAGFFAVAIVLALGF
MGNMVQSNSIADAVNSAFQIPPLVTGLVIAFLVGLIVIGGMSRIAHFTSNVVPIMAVFYLFGAFVIILTNYQEIIPAIKM
IVYGAFNPAAATGGIIGVTIREVFRYGIARGLFSNEAGMGSTPHAHAVAKVKHPAQQGLVGIFGVLFDTLIVCTVTALVI
IITEAYTTDLVGIELTQYGFYEGFGELGNSFIAISMFFFALSTIISWYFFAEANIRYLFGTKFLRVFQGLVLIFVVIGTS
LEVTVVWELADTFNGLMVIPNLIALLGMVSLVVKILNDYENNYEEDKSSTFEKEIK

Sequences:

>Translated_456_residues
MDSLSVIESINNVLWGPVMLVLLLGTGVLFTIKLRFIQLRRLKDTVRETFKKNEGVKADDEGMSSFQALATAIAAQVGTG
NLAGVATAIAAGGPGAVFWMWISGFFGMGTIFAEAVISQVYTEKVGGRVVGGPAYYIKHGLGSKALAGFFAVAIVLALGF
MGNMVQSNSIADAVNSAFQIPPLVTGLVIAFLVGLIVIGGMSRIAHFTSNVVPIMAVFYLFGAFVIILTNYQEIIPAIKM
IVYGAFNPAAATGGIIGVTIREVFRYGIARGLFSNEAGMGSTPHAHAVAKVKHPAQQGLVGIFGVLFDTLIVCTVTALVI
IITEAYTTDLVGIELTQYGFYEGFGELGNSFIAISMFFFALSTIISWYFFAEANIRYLFGTKFLRVFQGLVLIFVVIGTS
LEVTVVWELADTFNGLMVIPNLIALLGMVSLVVKILNDYENNYEEDKSSTFEKEIK
>Mature_456_residues
MDSLSVIESINNVLWGPVMLVLLLGTGVLFTIKLRFIQLRRLKDTVRETFKKNEGVKADDEGMSSFQALATAIAAQVGTG
NLAGVATAIAAGGPGAVFWMWISGFFGMGTIFAEAVISQVYTEKVGGRVVGGPAYYIKHGLGSKALAGFFAVAIVLALGF
MGNMVQSNSIADAVNSAFQIPPLVTGLVIAFLVGLIVIGGMSRIAHFTSNVVPIMAVFYLFGAFVIILTNYQEIIPAIKM
IVYGAFNPAAATGGIIGVTIREVFRYGIARGLFSNEAGMGSTPHAHAVAKVKHPAQQGLVGIFGVLFDTLIVCTVTALVI
IITEAYTTDLVGIELTQYGFYEGFGELGNSFIAISMFFFALSTIISWYFFAEANIRYLFGTKFLRVFQGLVLIFVVIGTS
LEVTVVWELADTFNGLMVIPNLIALLGMVSLVVKILNDYENNYEEDKSSTFEKEIK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=451, Percent_Identity=38.3592017738359, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 49035; Mature: 49035

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]