| Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
|---|---|
| Accession | NC_010718 |
| Length | 3,165,557 |
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The map label for this gene is fur [H]
Identifier: 188585764
GI number: 188585764
Start: 1204779
End: 1205210
Strand: Direct
Name: fur [H]
Synonym: Nther_1138
Alternate gene names: 188585764
Gene position: 1204779-1205210 (Clockwise)
Preceding gene: 188585763
Following gene: 188585768
Centisome position: 38.06
GC content: 26.85
Gene sequence:
>432_bases ATGGATTACGAGTTAGATTTAGCAGAAATAGAAAAAAAGTTTTATAATTATAAATTCACACCTCAAAGAAAAACTATTCT CAAGGTTTTATTTGAAAATAAAGGACATCACTTAAGTGCAGAAGAAATTTTACAGCTATCCAAAGAAAAAAATTCAGACA TTGGATTTGCTACAGTTTATAGAACTTTGGATTTATTTGAGGAACTTGAAATTGTACATAAGTTACATTTTGGTGATGGA TGTAGTAGATACGAATTAACTCGTACCGGATCTAGCCATCACCATCATTTGATTTGCCTAAATTGTAATCAAATTTTTGA AGTTAAAGATGACTTACTAAAAAAATTAGAAAATAATATTGAGACTCAGCATAATTTTAAAATTTCAGACCATAGATTAC ACTTTTATGGTTATTGTAAAAATTGTAAATAA
Upstream 100 bases:
>100_bases GAAATATCGGACTGGGACTAGCACTAGCACCTCCCATTAAGTTATTGACATATGTTAATAAATAAACTAGAATTGACATT AGGAAAGGCAGGGATCTTTA
Downstream 100 bases:
>100_bases ATTAAATAACACTTATCAGGGTGAATTAACCAATTAATAATCACCAGTGTCGTTTATTAATTGATTTTTTTCGTTGAAAA AGGTTTTGTAACCCAGTTGG
Product: ferric uptake regulator, Fur family
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MDYELDLAEIEKKFYNYKFTPQRKTILKVLFENKGHHLSAEEILQLSKEKNSDIGFATVYRTLDLFEELEIVHKLHFGDG CSRYELTRTGSSHHHHLICLNCNQIFEVKDDLLKKLENNIETQHNFKISDHRLHFYGYCKNCK
Sequences:
>Translated_143_residues MDYELDLAEIEKKFYNYKFTPQRKTILKVLFENKGHHLSAEEILQLSKEKNSDIGFATVYRTLDLFEELEIVHKLHFGDG CSRYELTRTGSSHHHHLICLNCNQIFEVKDDLLKKLENNIETQHNFKISDHRLHFYGYCKNCK >Mature_143_residues MDYELDLAEIEKKFYNYKFTPQRKTILKVLFENKGHHLSAEEILQLSKEKNSDIGFATVYRTLDLFEELEIVHKLHFGDG CSRYELTRTGSSHHHHLICLNCNQIFEVKDDLLKKLENNIETQHNFKISDHRLHFYGYCKNCK
Specific function: Iron uptake repressor. Acts on the transcription of ferri-siderophore uptake genes [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=127, Percent_Identity=38.5826771653543, Blast_Score=93, Evalue=5e-21,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 17034; Mature: 17034
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYELDLAEIEKKFYNYKFTPQRKTILKVLFENKGHHLSAEEILQLSKEKNSDIGFATVY CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHH RTLDLFEELEIVHKLHFGDGCSRYELTRTGSSHHHHLICLNCNQIFEVKDDLLKKLENNI HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCC ETQHNFKISDHRLHFYGYCKNCK CCCCCCEECCCEEEEEEEECCCC >Mature Secondary Structure MDYELDLAEIEKKFYNYKFTPQRKTILKVLFENKGHHLSAEEILQLSKEKNSDIGFATVY CCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCHHHHH RTLDLFEELEIVHKLHFGDGCSRYELTRTGSSHHHHLICLNCNQIFEVKDDLLKKLENNI HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCC ETQHNFKISDHRLHFYGYCKNCK CCCCCCEECCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9701813 [H]