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The map label for this gene is nrdD [H]

Identifier: 188584769

GI number: 188584769

Start: 150060

End: 152270

Strand: Direct

Name: nrdD [H]

Synonym: Nther_0127

Alternate gene names: 188584769

Gene position: 150060-152270 (Clockwise)

Preceding gene: 188584768

Following gene: 188584772

Centisome position: 4.74

GC content: 37.72

Gene sequence:

>2211_bases
ATGGAACATAAGGATGTTGCTTTAGTTACTGAAGTTTCTAAGATGCCTACAAAGGTTGTGAAAAGGGATGGCCGTGAACA
ACCCTTTGACCCTTCAAAAATAACCAATGCAATCAAAAAAGCTCTTAAGGCTATTGACAAAGAAGATCATTCCCTTGCCC
TTTCTTTGACATATCAAGTTATCAATAAATTAACTAAACATGGAGTAGACAAGCCCACAGTACCACAAATCCAAGAGATG
GTGGAAAATTCACTTATGGATACCGGTCACTATGAAGTTGCTAGGGCTTATGTCATTTATAGAAACGACCGGGATAGAAT
TAGAGAAGCAGATACCAAATTAATGAAAGAGCTATTAAAAGTATTAGAAACCAGGGACCAAGAAAACGCCAATGTGAATG
GCGATGCTCCCATGGGCAAAATGTTAAAAGGTGGCTCTGAAGCCATGAAAGAAGTGTATTTAAATCATTTTGCCAAAAAT
GAACACTCTCAAGCTCACAGAAATGGGTATATACATATACATGATGCCGATTTTGCTGCTATTGGAACAACCACATGTCT
TCAAATTCCATTAGATAGACTGTTAGCAGAAGGATTTAATACAGGACATGGTTGGATTACCACGCCAAAATCAATCGAAT
CAGCGGCATCTCTTAGTTGTATAGTGTTCCAGTCCAATCAAAATGATCAACATGGTGGGCAATCATTTGCCACCTTTGAC
TCTTCTCTGGCACCTTATGTAAAAATTACTTTTGATAAGATTAAAAATGAGCTTTCCCAATTAGGAATCTCAGAAAATAT
CGATGATAAGGCATGGGAACAGGTGAAAAAGCGGACTTATCAGGCTATGCAAATTTTTGTGTTTAATCTTAATACTATGC
ACAGTCGAGCAGGTGCTCAAGTGCCTTTTACTTCTGTTAATTTTGGGCTTGATACTAGCCCATGGGGTCGTTTGATTAGC
GAAATGCTACTGAAAGTATATAAGAAAGGTTTGGGTAGAGGGGAAACACCAATTTTCCCTAATTTAATTTTTTCCTTGGC
AACTGGAGTGAACAAAGAACCAGGGGATCCAAATTACGATTTGCGCCGCTTGGCTCATGAAGTTTCTTGTGAGCGTTTGT
TCCCAAACTATTCTAATCAGGATGCCTCTTATAATGCACCCTTTTATTATAGGGAAGAAGATCCTCAAGTAGTAGCTTAT
ATGGGCTGTAGGACTCGGGTGATATCAAACAGAAGAGGCCCTGAAGTTACTGAAGGTAGAGGTAACCTTTCTTTTACTTC
TATTAATTTACCTAGGATAGCTTTGGAAACAAGCTGTCCGAGTGATTTTTATCAACGGTTAGAAGACACTATTTGGTTGG
TTGCAGATCAATTATATGATAGATTTAAAATCCAAAAAAATAAAAAGGCCAAAGAATTTCCTTTTCTTATGGGGCAAGGA
CTTTACATGGATAGTGAAGACTTTGAGTCAGAAGAGACTTTAGAAGAAGCTTTGAAACATGGGACTTTATCCATTGGTTT
TATTGGACTCGCAGAAGCATTAAAGGCCATGATAGGTGAGCACCATGGTGAATCCGAAGAGGCCTTTAAAAAGGGATTGC
AAATTGTTGAATTTATGGACAATATTTGTAAAAAAGCGTCTGAACAGTACAACCTTAATTTCAGTCTCTTAGCTACTCCA
GCCGAAGGACTGTCCGGCAGGTTTACAGAGCTTGACAGAGAGACCTTTGGAGAGATAGAAGGGGTTACTGATAAAGAATG
GTATACTAATTCATTCCATATTCCTGTTGAGTATTCTATAAGCGCTTATGAAAAAATTAGAAAGGAATCAGCTTTTAACA
AATATACTCCTGCAGGTCATATTAATTACGTAGAATTAGATGCTGCTCCTAAAGGCAATATAGATGCCTTTGAACAGCTA
GTAAATGCTGCTATGGATAATGACTGTGGATACTTTTCTGTTAACTTTCCTGTAGATCAGTGCTTAAATTGTGCAAATAA
TGGAGTGATAGATTCGGAGACATGCCCTGTTTGTGGTTCACGTAGAATTCAAAGAGTAAGAAGAGTTACAGGTTATTTGG
GTGTTTTAGAAGAAATCCCCGATGAAGAGGGGGAAGGAAAAACTTCTGGTTTTAATGATGGTAAATATCATGAATGTTTA
AATAGAGTCAGTCATCTACAGGGTTTTCAAACAAAAGATGATCAAAATTAA

Upstream 100 bases:

>100_bases
TTTTTTGAAATGGGAATGGTATATATAAATATGATAGAATTCATTGGACACATAGAAAATAGATTTAGATAAGTTAACTA
AATAAAGGAGAGATGTATTA

Downstream 100 bases:

>100_bases
AAACTAGTGAAAGGTTCCCCAGAAACTCTATGGGGAACCTTATTAATTTAGTAGGCTTAGCAAAACAAAACCCATTCTGT
TATCTGGTTTTAATTTTTCT

Product: anaerobic ribonucleoside-triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 736; Mature: 736

Protein sequence:

>736_residues
MEHKDVALVTEVSKMPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTVPQIQEM
VENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQENANVNGDAPMGKMLKGGSEAMKEVYLNHFAKN
EHSQAHRNGYIHIHDADFAAIGTTTCLQIPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFD
SSLAPYVKITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNFGLDTSPWGRLIS
EMLLKVYKKGLGRGETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHEVSCERLFPNYSNQDASYNAPFYYREEDPQVVAY
MGCRTRVISNRRGPEVTEGRGNLSFTSINLPRIALETSCPSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQG
LYMDSEDFESEETLEEALKHGTLSIGFIGLAEALKAMIGEHHGESEEAFKKGLQIVEFMDNICKKASEQYNLNFSLLATP
AEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSISAYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQL
VNAAMDNDCGYFSVNFPVDQCLNCANNGVIDSETCPVCGSRRIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGKYHECL
NRVSHLQGFQTKDDQN

Sequences:

>Translated_736_residues
MEHKDVALVTEVSKMPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTVPQIQEM
VENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQENANVNGDAPMGKMLKGGSEAMKEVYLNHFAKN
EHSQAHRNGYIHIHDADFAAIGTTTCLQIPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFD
SSLAPYVKITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNFGLDTSPWGRLIS
EMLLKVYKKGLGRGETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHEVSCERLFPNYSNQDASYNAPFYYREEDPQVVAY
MGCRTRVISNRRGPEVTEGRGNLSFTSINLPRIALETSCPSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQG
LYMDSEDFESEETLEEALKHGTLSIGFIGLAEALKAMIGEHHGESEEAFKKGLQIVEFMDNICKKASEQYNLNFSLLATP
AEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSISAYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQL
VNAAMDNDCGYFSVNFPVDQCLNCANNGVIDSETCPVCGSRRIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGKYHECL
NRVSHLQGFQTKDDQN
>Mature_736_residues
MEHKDVALVTEVSKMPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQVINKLTKHGVDKPTVPQIQEM
VENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLKVLETRDQENANVNGDAPMGKMLKGGSEAMKEVYLNHFAKN
EHSQAHRNGYIHIHDADFAAIGTTTCLQIPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFD
SSLAPYVKITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQVPFTSVNFGLDTSPWGRLIS
EMLLKVYKKGLGRGETPIFPNLIFSLATGVNKEPGDPNYDLRRLAHEVSCERLFPNYSNQDASYNAPFYYREEDPQVVAY
MGCRTRVISNRRGPEVTEGRGNLSFTSINLPRIALETSCPSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQG
LYMDSEDFESEETLEEALKHGTLSIGFIGLAEALKAMIGEHHGESEEAFKKGLQIVEFMDNICKKASEQYNLNFSLLATP
AEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSISAYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQL
VNAAMDNDCGYFSVNFPVDQCLNCANNGVIDSETCPVCGSRRIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGKYHECL
NRVSHLQGFQTKDDQN

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=732, Percent_Identity=32.9234972677596, Blast_Score=357, Evalue=2e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 82995; Mature: 82995

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHKDVALVTEVSKMPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH
INKLTKHGVDKPTVPQIQEMVENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLK
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHH
VLETRDQENANVNGDAPMGKMLKGGSEAMKEVYLNHFAKNEHSQAHRNGYIHIHDADFAA
HHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCHH
IGTTTCLQIPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFD
HCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHCCEEEEEEECCCCCCCCCCCHHHHC
SSLAPYVKITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQ
CCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHCCCCC
VPFTSVNFGLDTSPWGRLISEMLLKVYKKGLGRGETPIFPNLIFSLATGVNKEPGDPNYD
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH
LRRLAHEVSCERLFPNYSNQDASYNAPFYYREEDPQVVAYMGCRTRVISNRRGPEVTEGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHCCCCCCCCCCCC
GNLSFTSINLPRIALETSCPSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQG
CCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCC
LYMDSEDFESEETLEEALKHGTLSIGFIGLAEALKAMIGEHHGESEEAFKKGLQIVEFMD
CEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NICKKASEQYNLNFSLLATPAEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSI
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCH
SAYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQLVNAAMDNDCGYFSVNFPVDQ
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH
CLNCANNGVIDSETCPVCGSRRIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGKYHECL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
NRVSHLQGFQTKDDQN
HHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEHKDVALVTEVSKMPTKVVKRDGREQPFDPSKITNAIKKALKAIDKEDHSLALSLTYQV
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHH
INKLTKHGVDKPTVPQIQEMVENSLMDTGHYEVARAYVIYRNDRDRIREADTKLMKELLK
HHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHH
VLETRDQENANVNGDAPMGKMLKGGSEAMKEVYLNHFAKNEHSQAHRNGYIHIHDADFAA
HHHCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCHH
IGTTTCLQIPLDRLLAEGFNTGHGWITTPKSIESAASLSCIVFQSNQNDQHGGQSFATFD
HCCHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHCCEEEEEEECCCCCCCCCCCHHHHC
SSLAPYVKITFDKIKNELSQLGISENIDDKAWEQVKKRTYQAMQIFVFNLNTMHSRAGAQ
CCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHEEECHHHHHCCCCC
VPFTSVNFGLDTSPWGRLISEMLLKVYKKGLGRGETPIFPNLIFSLATGVNKEPGDPNYD
CCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHH
LRRLAHEVSCERLFPNYSNQDASYNAPFYYREEDPQVVAYMGCRTRVISNRRGPEVTEGR
HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCEEEECCHHHHHHCCCCCCCCCCCC
GNLSFTSINLPRIALETSCPSDFYQRLEDTIWLVADQLYDRFKIQKNKKAKEFPFLMGQG
CCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCCC
LYMDSEDFESEETLEEALKHGTLSIGFIGLAEALKAMIGEHHGESEEAFKKGLQIVEFMD
CEECCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
NICKKASEQYNLNFSLLATPAEGLSGRFTELDRETFGEIEGVTDKEWYTNSFHIPVEYSI
HHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCH
SAYEKIRKESAFNKYTPAGHINYVELDAAPKGNIDAFEQLVNAAMDNDCGYFSVNFPVDQ
HHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHH
CLNCANNGVIDSETCPVCGSRRIQRVRRVTGYLGVLEEIPDEEGEGKTSGFNDGKYHECL
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
NRVSHLQGFQTKDDQN
HHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]