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The map label for this gene is rsmI [H]

Identifier: 188584683

GI number: 188584683

Start: 55590

End: 56447

Strand: Direct

Name: rsmI [H]

Synonym: Nther_0041

Alternate gene names: 188584683

Gene position: 55590-56447 (Clockwise)

Preceding gene: 188584681

Following gene: 188584685

Centisome position: 1.76

GC content: 34.97

Gene sequence:

>858_bases
ATGGGGAACAATACCAAAAAAGGAAAATTGTTTTTATGTCCGACTCCTATTGGTAATTTGCGGGATATTACTTTAAGAGT
AATTGATTGCTTAAAGGAAGTGAATTTAGTGGCCTGTGAAGATACCAGGCGGACTAAGAAATTATTGAATCATTTGGAAA
TAAATGTAGAAATGTTAAGTTATCATAAATTTAATCAAGAAAGTCGGGGTCAACAAATAATTGAGAAGTTACTACAGGGG
ATGGATGTAGCTTTAGTATCAGATGCTGGGACTCCATCAATTTCTGATCCCGGGAAATTTTTGGTGCAAGAAGCAATTCA
GAAAGAAATAGAAGTCATAGCCTTACCGGGGCCTTCAGCGCCAATTACCGCCTTGGCGGGTTCTGGTTTAGATACTGATT
CCTTTATGTTTTTAGGTTATATTCCTGAAAAAGGAATAGAAAGAAAGGATATATTAGCTGAAATAATTGGCTCAGCACAT
ACGGTTATCCTTTATGAGAACTATAATCGACTAGAAAAAACCATTAATGATTTAAGTAAGCAATTAGGTAAACGCCAAAT
TGTAATTGCCAAAGAGTTAACAAAAGTTCATGAACAGTATATTAGAGGTACAGCTAAAGAATTATTGGAATATCTTGAAA
AGAACAGTATAAAAGGTGAATGCACTGTATTGATACAAGGGGCAAATCACACCACGGAGCTAAACTACTTGCCAGGAGAA
GATGCAAAAAGTCACTTGAATGAATTAATAGGTCAAGGTTTTACAAAGAAACAAGCTATCAAGTTGGTGAGCCAGCTCAG
AGAAATTCCTAAACGTGAAGTTTATCAAATAGCTCTAGAATTAGAAAAAGAAAAATAA

Upstream 100 bases:

>100_bases
CATTAATGATGCTCCTTTAGAAGGTGATATTAGTTTAGCTTTAGTTTTGCCCTTGTATAGTATATTATTCTCTGGGAAAA
AGTAGAATAGAGGTGACACT

Downstream 100 bases:

>100_bases
ATTAAGTGGCAAGCATTTTAGTGCTTGCCACTAATAAAATTTAGTCTGTTATTGGGATTGGAAATTTTGTTATTGTTCAG
AATTTACCATTAGGTTAAGA

Product: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MGNNTKKGKLFLCPTPIGNLRDITLRVIDCLKEVNLVACEDTRRTKKLLNHLEINVEMLSYHKFNQESRGQQIIEKLLQG
MDVALVSDAGTPSISDPGKFLVQEAIQKEIEVIALPGPSAPITALAGSGLDTDSFMFLGYIPEKGIERKDILAEIIGSAH
TVILYENYNRLEKTINDLSKQLGKRQIVIAKELTKVHEQYIRGTAKELLEYLEKNSIKGECTVLIQGANHTTELNYLPGE
DAKSHLNELIGQGFTKKQAIKLVSQLREIPKREVYQIALELEKEK

Sequences:

>Translated_285_residues
MGNNTKKGKLFLCPTPIGNLRDITLRVIDCLKEVNLVACEDTRRTKKLLNHLEINVEMLSYHKFNQESRGQQIIEKLLQG
MDVALVSDAGTPSISDPGKFLVQEAIQKEIEVIALPGPSAPITALAGSGLDTDSFMFLGYIPEKGIERKDILAEIIGSAH
TVILYENYNRLEKTINDLSKQLGKRQIVIAKELTKVHEQYIRGTAKELLEYLEKNSIKGECTVLIQGANHTTELNYLPGE
DAKSHLNELIGQGFTKKQAIKLVSQLREIPKREVYQIALELEKEK
>Mature_284_residues
GNNTKKGKLFLCPTPIGNLRDITLRVIDCLKEVNLVACEDTRRTKKLLNHLEINVEMLSYHKFNQESRGQQIIEKLLQGM
DVALVSDAGTPSISDPGKFLVQEAIQKEIEVIALPGPSAPITALAGSGLDTDSFMFLGYIPEKGIERKDILAEIIGSAHT
VILYENYNRLEKTINDLSKQLGKRQIVIAKELTKVHEQYIRGTAKELLEYLEKNSIKGECTVLIQGANHTTELNYLPGED
AKSHLNELIGQGFTKKQAIKLVSQLREIPKREVYQIALELEKEK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=240, Percent_Identity=40.4166666666667, Blast_Score=187, Evalue=6e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 31934; Mature: 31803

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNNTKKGKLFLCPTPIGNLRDITLRVIDCLKEVNLVACEDTRRTKKLLNHLEINVEMLS
CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHEEH
YHKFNQESRGQQIIEKLLQGMDVALVSDAGTPSISDPGKFLVQEAIQKEIEVIALPGPSA
HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCC
PITALAGSGLDTDSFMFLGYIPEKGIERKDILAEIIGSAHTVILYENYNRLEKTINDLSK
CHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
QLGKRQIVIAKELTKVHEQYIRGTAKELLEYLEKNSIKGECTVLIQGANHTTELNYLPGE
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCC
DAKSHLNELIGQGFTKKQAIKLVSQLREIPKREVYQIALELEKEK
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GNNTKKGKLFLCPTPIGNLRDITLRVIDCLKEVNLVACEDTRRTKKLLNHLEINVEMLS
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHEEH
YHKFNQESRGQQIIEKLLQGMDVALVSDAGTPSISDPGKFLVQEAIQKEIEVIALPGPSA
HHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCC
PITALAGSGLDTDSFMFLGYIPEKGIERKDILAEIIGSAHTVILYENYNRLEKTINDLSK
CHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH
QLGKRQIVIAKELTKVHEQYIRGTAKELLEYLEKNSIKGECTVLIQGANHTTELNYLPGE
HHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEECCCCCC
DAKSHLNELIGQGFTKKQAIKLVSQLREIPKREVYQIALELEKEK
CHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]