Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
---|---|
Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is guaB [H]
Identifier: 188584671
GI number: 188584671
Start: 42241
End: 43698
Strand: Direct
Name: guaB [H]
Synonym: Nther_0029
Alternate gene names: 188584671
Gene position: 42241-43698 (Clockwise)
Preceding gene: 188584669
Following gene: 188584672
Centisome position: 1.33
GC content: 38.61
Gene sequence:
>1458_bases ATGGAATACAATGATAAAATTGTAAATGAAGGGCTTACTTTTGATGATGTGCTTTTGGTCCCTTCTAAATCTCAAATAAT CCCTAAAGACATTGATATTCAAACCAGGCTAACTAATAAAATTAGATTAAATATTCCCTTGATGAGTGCAGGTATGGATA CTGTCACTGAAGCTCGCCTTGCCGTAGCCATGGCAAGAGAAGGCGGCATTGGTATCATTCACAAGAATATGTCGATTGAT AAGCAGGCTACTGAAGTAGATCGGGTTAAGAGATCGGAACACGGTGTAATTACAAATCCTTTCTCTTTATCCCAAAATCA TAAAATATCCGATGCTGCAGCTTTAATGGAACGCTATCGTATATCAGGGGTTCCTATTACGGAAAGTGGTAAATTAATTG GTATCATTACCAACCGCGATTTGAGATTTGAAACCGATTTTAACAGACCGATAAAAGAAGTTATGACAGATTCAAATTTA ATAACAGCTTCTGAAGGAATCTCAATGTCAGAAGCTCAGAAGATTCTTCAGGAAAATAAAGTTGAAAAACTACCTTTAAC TGATGATGAAGGAAACTTAAAAGGTTTGATAACCATAAAAGATATTGAAAAATCAATTAAGTTTCCCAATGCCGCTAAAG ATGAAACTGGTCGGTTACTGGCAGGTGCCGCAGTAGGCCCAGGCAAGGATCTGGATGAACGAGTAGCAGCTTTAGTTGAG GCCAAAGTTGATGTAATTGTTATCGATACTGCCCATGGTCATTCACAGAATGTAATTAAAGCTGTTAGATACGTTAAAGA AACATATCCTGATGTGGAACTAGTAGCAGGTAATGTAGCCACAACTGAAGGAACTAAAGATTTAATAGAAGCGGGAGCTG ATGCGGTCAAAGTAGGAGTTGGCCCCGGATCAATATGTACTACTCGAATAGTTTGTGGAGTTGGGGTTCCCCAAATAACA GCTGTATTAGATTGTGCTAAGGTTGCTAAAGAATACGGAGTACCAATAATTTCTGATGGTGGTATCAAATATTCTGGAGA TATAGCTAAGGCTTTATCAGTAGGGGCTGATGTTGTCATGATTGGCAGCTTATTTGCTGGTACTGATGAAAGTCCGGGTG AATTTGAAATTTATCAAGGCCGCAGTTATAAAGTCTATAGAGGAATGGGATCTGAAACCTCAATGAAATTAGGAAGTAAA GACAGATATTTCCAAGAAGACAAAAGGAAATTCGTTCCAGAAGGGATAGAAGGACGGGTTCCGTATCGTGGAACCTTACA AGATACAGTTTATCAATTAGTTGGGGGTTTAAGATCCGGTATGGGATATTGTGGTGCTGCTGATATCGAAAGTTTACAAA AGGATTCTCGTATGGTAAGAATCACTGCTTCGGGGTTAAAGGAAAGTCACCCCCACGATGTTCAAATCACTAAAGAAGCA CCTAATTATTCATTATAA
Upstream 100 bases:
>100_bases CACGTGCTAGTTTGATAAGGACTAGGGTCAATAGGACTAGGAAAACTAATTATAAATAATTTTGTTATATGTTTTAATTA ACCGAGGAGGTGTAATACTC
Downstream 100 bases:
>100_bases TTAGGTGCTTTTCTTTCAGGGCATACTTTTAAGTTTTGAAATGTTAATTAAATAAAATTTTTTTATTTTTTAAGAAGGAA TTTTCTTTAACAAATCGAAT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MEYNDKIVNEGLTFDDVLLVPSKSQIIPKDIDIQTRLTNKIRLNIPLMSAGMDTVTEARLAVAMAREGGIGIIHKNMSID KQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYRISGVPITESGKLIGIITNRDLRFETDFNRPIKEVMTDSNL ITASEGISMSEAQKILQENKVEKLPLTDDEGNLKGLITIKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVE AKVDVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGVGPGSICTTRIVCGVGVPQIT AVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVMIGSLFAGTDESPGEFEIYQGRSYKVYRGMGSETSMKLGSK DRYFQEDKRKFVPEGIEGRVPYRGTLQDTVYQLVGGLRSGMGYCGAADIESLQKDSRMVRITASGLKESHPHDVQITKEA PNYSL
Sequences:
>Translated_485_residues MEYNDKIVNEGLTFDDVLLVPSKSQIIPKDIDIQTRLTNKIRLNIPLMSAGMDTVTEARLAVAMAREGGIGIIHKNMSID KQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYRISGVPITESGKLIGIITNRDLRFETDFNRPIKEVMTDSNL ITASEGISMSEAQKILQENKVEKLPLTDDEGNLKGLITIKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVE AKVDVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGVGPGSICTTRIVCGVGVPQIT AVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVMIGSLFAGTDESPGEFEIYQGRSYKVYRGMGSETSMKLGSK DRYFQEDKRKFVPEGIEGRVPYRGTLQDTVYQLVGGLRSGMGYCGAADIESLQKDSRMVRITASGLKESHPHDVQITKEA PNYSL >Mature_485_residues MEYNDKIVNEGLTFDDVLLVPSKSQIIPKDIDIQTRLTNKIRLNIPLMSAGMDTVTEARLAVAMAREGGIGIIHKNMSID KQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYRISGVPITESGKLIGIITNRDLRFETDFNRPIKEVMTDSNL ITASEGISMSEAQKILQENKVEKLPLTDDEGNLKGLITIKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVE AKVDVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGVGPGSICTTRIVCGVGVPQIT AVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVMIGSLFAGTDESPGEFEIYQGRSYKVYRGMGSETSMKLGSK DRYFQEDKRKFVPEGIEGRVPYRGTLQDTVYQLVGGLRSGMGYCGAADIESLQKDSRMVRITASGLKESHPHDVQITKEA PNYSL
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=453, Percent_Identity=43.046357615894, Blast_Score=355, Evalue=5e-98, Organism=Homo sapiens, GI34328930, Length=453, Percent_Identity=43.046357615894, Blast_Score=355, Evalue=8e-98, Organism=Homo sapiens, GI34328928, Length=453, Percent_Identity=43.046357615894, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI156616279, Length=453, Percent_Identity=43.046357615894, Blast_Score=354, Evalue=1e-97, Organism=Homo sapiens, GI66933016, Length=453, Percent_Identity=41.0596026490066, Blast_Score=346, Evalue=2e-95, Organism=Homo sapiens, GI217035152, Length=447, Percent_Identity=42.9530201342282, Blast_Score=346, Evalue=3e-95, Organism=Homo sapiens, GI217035148, Length=453, Percent_Identity=42.3841059602649, Blast_Score=343, Evalue=2e-94, Organism=Homo sapiens, GI217035150, Length=453, Percent_Identity=40.1766004415011, Blast_Score=318, Evalue=9e-87, Organism=Homo sapiens, GI156104880, Length=239, Percent_Identity=40.1673640167364, Blast_Score=182, Evalue=5e-46, Organism=Homo sapiens, GI50541956, Length=242, Percent_Identity=40.0826446280992, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI50541954, Length=242, Percent_Identity=40.0826446280992, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI50541952, Length=242, Percent_Identity=40.0826446280992, Blast_Score=178, Evalue=9e-45, Organism=Homo sapiens, GI50541948, Length=242, Percent_Identity=40.0826446280992, Blast_Score=178, Evalue=9e-45, Organism=Escherichia coli, GI1788855, Length=484, Percent_Identity=55.3719008264463, Blast_Score=500, Evalue=1e-143, Organism=Escherichia coli, GI1786293, Length=219, Percent_Identity=40.1826484018265, Blast_Score=172, Evalue=4e-44, Organism=Caenorhabditis elegans, GI71994385, Length=471, Percent_Identity=37.791932059448, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI71994389, Length=420, Percent_Identity=40.2380952380952, Blast_Score=280, Evalue=9e-76, Organism=Caenorhabditis elegans, GI17560440, Length=223, Percent_Identity=43.4977578475336, Blast_Score=186, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6323585, Length=490, Percent_Identity=39.1836734693878, Blast_Score=345, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6323464, Length=490, Percent_Identity=39.7959183673469, Blast_Score=339, Evalue=6e-94, Organism=Saccharomyces cerevisiae, GI6322012, Length=490, Percent_Identity=38.1632653061225, Blast_Score=338, Evalue=9e-94, Organism=Saccharomyces cerevisiae, GI6319352, Length=347, Percent_Identity=40.0576368876081, Blast_Score=270, Evalue=4e-73, Organism=Saccharomyces cerevisiae, GI6319353, Length=97, Percent_Identity=41.2371134020619, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24641071, Length=481, Percent_Identity=38.4615384615385, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI24641073, Length=481, Percent_Identity=38.4615384615385, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=38.9521640091116, Blast_Score=303, Evalue=2e-82,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52476; Mature: 52476
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYNDKIVNEGLTFDDVLLVPSKSQIIPKDIDIQTRLTNKIRLNIPLMSAGMDTVTEARL CCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCHHHHHHHH AVAMAREGGIGIIHKNMSIDKQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYR HHEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH ISGVPITESGKLIGIITNRDLRFETDFNRPIKEVMTDSNLITASEGISMSEAQKILQENK CCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHCC VEKLPLTDDEGNLKGLITIKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVE CCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH AKVDVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGV CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHCCCCEEEECC GPGSICTTRIVCGVGVPQITAVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVM CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHCCCCEEE IGSLFAGTDESPGEFEIYQGRSYKVYRGMGSETSMKLGSKDRYFQEDKRKFVPEGIEGRV EEHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC PYRGTLQDTVYQLVGGLRSGMGYCGAADIESLQKDSRMVRITASGLKESHPHDVQITKEA CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECC PNYSL CCCCC >Mature Secondary Structure MEYNDKIVNEGLTFDDVLLVPSKSQIIPKDIDIQTRLTNKIRLNIPLMSAGMDTVTEARL CCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCEEEEECCEEEEEEEEECCCCHHHHHHHH AVAMAREGGIGIIHKNMSIDKQATEVDRVKRSEHGVITNPFSLSQNHKISDAAALMERYR HHEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHH ISGVPITESGKLIGIITNRDLRFETDFNRPIKEVMTDSNLITASEGISMSEAQKILQENK CCCCCCCCCCCEEEEEECCCEEEECCCCCHHHHHHCCCCEEEECCCCCHHHHHHHHHHCC VEKLPLTDDEGNLKGLITIKDIEKSIKFPNAAKDETGRLLAGAAVGPGKDLDERVAALVE CCCCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH AKVDVIVIDTAHGHSQNVIKAVRYVKETYPDVELVAGNVATTEGTKDLIEAGADAVKVGV CCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHCCCCEEEECC GPGSICTTRIVCGVGVPQITAVLDCAKVAKEYGVPIISDGGIKYSGDIAKALSVGADVVM CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEEEECCCEEECCHHHHHHHCCCCEEE IGSLFAGTDESPGEFEIYQGRSYKVYRGMGSETSMKLGSKDRYFQEDKRKFVPEGIEGRV EEHHHCCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC PYRGTLQDTVYQLVGGLRSGMGYCGAADIESLQKDSRMVRITASGLKESHPHDVQITKEA CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECC PNYSL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]