| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
Click here to switch to the map view.
The map label for this gene is 188527598
Identifier: 188527598
GI number: 188527598
Start: 797193
End: 797255
Strand: Reverse
Name: 188527598
Synonym: HPSH_04100
Alternate gene names: NA
Gene position: 797255-797193 (Counterclockwise)
Preceding gene: 188527600
Following gene: 188527589
Centisome position: 49.56
GC content: 26.98
Gene sequence:
>63_bases TTGGCTTTGCTTTTATTGAGCGTTGGTTATAAAAAAAATATTGCATTTTTTAAGATTGGATAG
Upstream 100 bases:
>100_bases CTTTCTTTTTTAAAAATACCATTAGACCTAACTTTTGTATTGTAAAATGAGAACGCTTTCATTCAACACGCCGATAAAAT GATAGCAAGGAGTGAAAAAT
Downstream 100 bases:
>100_bases TAAAGAGCTTATTCAAGCGGTATTTTTTAAAGCGTTCTTTAGGGGGGATTTTAGTTGTAGGGGGGAATTGTTTCAAAATA CCCCTTATTTCTTTAAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 20; Mature: 19
Protein sequence:
>20_residues MALLLLSVGYKKNIAFFKIG
Sequences:
>Translated_20_residues MALLLLSVGYKKNIAFFKIG >Mature_19_residues ALLLLSVGYKKNIAFFKIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 2227; Mature: 2096
Theoretical pI: Translated: 10.64; Mature: 10.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLLLSVGYKKNIAFFKIG CEEEEEECCCCCCEEEEEEC >Mature Secondary Structure ALLLLSVGYKKNIAFFKIG EEEEEECCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA