Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188527598

Identifier: 188527598

GI number: 188527598

Start: 797193

End: 797255

Strand: Reverse

Name: 188527598

Synonym: HPSH_04100

Alternate gene names: NA

Gene position: 797255-797193 (Counterclockwise)

Preceding gene: 188527600

Following gene: 188527589

Centisome position: 49.56

GC content: 26.98

Gene sequence:

>63_bases
TTGGCTTTGCTTTTATTGAGCGTTGGTTATAAAAAAAATATTGCATTTTTTAAGATTGGATAG

Upstream 100 bases:

>100_bases
CTTTCTTTTTTAAAAATACCATTAGACCTAACTTTTGTATTGTAAAATGAGAACGCTTTCATTCAACACGCCGATAAAAT
GATAGCAAGGAGTGAAAAAT

Downstream 100 bases:

>100_bases
TAAAGAGCTTATTCAAGCGGTATTTTTTAAAGCGTTCTTTAGGGGGGATTTTAGTTGTAGGGGGGAATTGTTTCAAAATA
CCCCTTATTTCTTTAAGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 20; Mature: 19

Protein sequence:

>20_residues
MALLLLSVGYKKNIAFFKIG

Sequences:

>Translated_20_residues
MALLLLSVGYKKNIAFFKIG
>Mature_19_residues
ALLLLSVGYKKNIAFFKIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 2227; Mature: 2096

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLLLSVGYKKNIAFFKIG
CEEEEEECCCCCCEEEEEEC
>Mature Secondary Structure 
ALLLLSVGYKKNIAFFKIG
EEEEEECCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA