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The map label for this gene is 188527555

Identifier: 188527555

GI number: 188527555

Start: 760841

End: 761419

Strand: Reverse

Name: 188527555

Synonym: HPSH_03885

Alternate gene names: NA

Gene position: 761419-760841 (Counterclockwise)

Preceding gene: 188527557

Following gene: 188527549

Centisome position: 47.34

GC content: 39.03

Gene sequence:

>579_bases
GTGTTAGAAAAACCTTTTTTAAAAAGCAAGCAACTATTTTTATGCGGATTGGGTGTTTTGATGTTGCAAGCTTGCACTTG
CCCAAACACTTCACAAAGAAATTCTTTTTTACAAGATGTGCCTTATTGGATGTTGCAAAATCGCAGCCAGTATATCACGC
AAGGGGTGGATAGCTCGCACATTGTAGATGGTAAGACAACTGAAGAGATAGAAAAAATCGCTACCAAAAGAGCGACAATG
AGAGTGGCGCAAAATATCGTGCATAAACTCAAAGAGGCTTACCTTTCCAAATCCAATCGCATCAAGCAAAAGATCACTAA
TGAGATGTTCATCCAAATGACACAGCCCATTTTTGACAGCTTGATGAATGTGGATCGTTTAGGGATTTATATCAATCCTA
ACAATGAGGAAGTGTTTGCGTTAGTGCGCGCGCGTTCTTTTGATAAGGACGCTTTGAGCGAAGGGTTGCATAAAATGTCC
TTAGACAATCAAGCGGTGAGTATTCTTATTTCTAAAGTGGAAGAAATCTTTAAAGATTCTATCAATTACGGAGATGTTAA
AGTCCCTATAGCCATGTAG

Upstream 100 bases:

>100_bases
GTTTTAATCATTTTATTTTTTTTATTTTTTACCTAATTATTGCTTAAAATCTTAAAGATTTGTGTTACACTCTGTAAAAT
CAAAATCAAAGGAGATAAGC

Downstream 100 bases:

>100_bases
GCTTAGAACAATAAGGGTTCTTCGCTATCGTCGGTTTTTTTGGGGGTGGGGGTGATGGAATTAGGGGTTGAATAGTAGGG
GATTTCATCCACGATTTCTT

Product: tumor necrosis factor alpha-inducing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLEKPFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYITQGVDSSHIVDGKTTEEIEKIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIFDSLMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKMS
LDNQAVSILISKVEEIFKDSINYGDVKVPIAM

Sequences:

>Translated_192_residues
MLEKPFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYITQGVDSSHIVDGKTTEEIEKIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIFDSLMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKMS
LDNQAVSILISKVEEIFKDSINYGDVKVPIAM
>Mature_192_residues
MLEKPFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYITQGVDSSHIVDGKTTEEIEKIATKRATM
RVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIFDSLMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKMS
LDNQAVSILISKVEEIFKDSINYGDVKVPIAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21923; Mature: 21923

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKPFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYITQGVDSSH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKTTEEIEKIATKRATMRVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIFDS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKMSLDNQAVSILISKVEEIFKDS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
INYGDVKVPIAM
CCCCCEEEEECC
>Mature Secondary Structure
MLEKPFLKSKQLFLCGLGVLMLQACTCPNTSQRNSFLQDVPYWMLQNRSQYITQGVDSSH
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCC
IVDGKTTEEIEKIATKRATMRVAQNIVHKLKEAYLSKSNRIKQKITNEMFIQMTQPIFDS
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LMNVDRLGIYINPNNEEVFALVRARSFDKDALSEGLHKMSLDNQAVSILISKVEEIFKDS
HHCHHHEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
INYGDVKVPIAM
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA