| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is adk
Identifier: 188527534
GI number: 188527534
Start: 727240
End: 727815
Strand: Reverse
Name: adk
Synonym: HPSH_03780
Alternate gene names: 188527534
Gene position: 727815-727240 (Counterclockwise)
Preceding gene: 188527535
Following gene: 188527533
Centisome position: 45.25
GC content: 40.62
Gene sequence:
>576_bases ATGAAACAACTATTTTTGATTATTGGAGCCCCAGGGAGTGGTAAAACCACTGATGCAGAGCTTATCGCTAAGAATAACAG CGAAAAAATCGCTCATTTTTCTACCGGGGATTTACTAAGGGCTGAGAGCGCTAAAAAGACCGAGCGAGGCTTATTGATTG AGAAATTCACTTCTCAAGGCGAATTAGTGCCTTTAGAAATTGTGGTAGAAACGATCCTTTCAGCGATTAAAAGCTCTGAT AAAGGGATCATTTTAATTGATGGCTATCCTAGGAGCGTGGAACAGATGCAGGCTTTGGATAAGGAATTGAGCGCTCAAAA TGAAGTGGTTTTAAAAAGCGTGATTGAAGTGGAAGTGAGTGAAAACACCGCTAAAGAAAGGGTTTTAGGGCGCTCTAGGG GGGCTGATGATAATGAGATGGTGTTTCATAACCGCATGCGGGTGTTTTTGGATCCGTTGGGTGAGATCCAAAATTTTTAC AAGAATAAGAAGGTGTATAAAGCGATCAATGGCGAAAGAAGCATTGAAGAAATCGTGCATGAAATGCAAGAGTATATTTT GTCTTTTGGGAATTAA
Upstream 100 bases:
>100_bases AAAGCTTCATGTTTATTGACTGACGCTCCTAGCCCCATTAATGAAGAGCAACTAAGAGAATTACACATTCGCTTAAGAAA ATAATTTGAAAGGATAAGAT
Downstream 100 bases:
>100_bases AATGCACCACAAAGAGAATGAGCTGTGATTTGTGTCTATATCATTTCTTTAAAAGAAAGTCAAAGGCGTTTGGATACTGA AAAACTCGTTTTAGAATCTA
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSD KGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVSENTAKERVLGRSRGADDNEMVFHNRMRVFLDPLGEIQNFY KNKKVYKAINGERSIEEIVHEMQEYILSFGN
Sequences:
>Translated_191_residues MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSD KGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVSENTAKERVLGRSRGADDNEMVFHNRMRVFLDPLGEIQNFY KNKKVYKAINGERSIEEIVHEMQEYILSFGN >Mature_191_residues MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQGELVPLEIVVETILSAIKSSD KGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVSENTAKERVLGRSRGADDNEMVFHNRMRVFLDPLGEIQNFY KNKKVYKAINGERSIEEIVHEMQEYILSFGN
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502011, Length=190, Percent_Identity=30, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI28144899, Length=185, Percent_Identity=32.4324324324324, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI28144897, Length=185, Percent_Identity=32.4324324324324, Blast_Score=88, Evalue=5e-18, Organism=Homo sapiens, GI7706497, Length=192, Percent_Identity=29.6875, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI4502013, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI7524346, Length=200, Percent_Identity=27.5, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI19923437, Length=126, Percent_Identity=34.1269841269841, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1786680, Length=140, Percent_Identity=32.1428571428571, Blast_Score=62, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567503, Length=183, Percent_Identity=36.0655737704918, Blast_Score=101, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17533833, Length=187, Percent_Identity=28.3422459893048, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17550688, Length=186, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17552384, Length=215, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322828, Length=190, Percent_Identity=28.9473684210526, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6320432, Length=132, Percent_Identity=37.8787878787879, Blast_Score=74, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6321018, Length=202, Percent_Identity=27.2277227722772, Blast_Score=73, Evalue=2e-14, Organism=Drosophila melanogaster, GI221459597, Length=193, Percent_Identity=27.979274611399, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI21356893, Length=193, Percent_Identity=27.979274611399, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI17737899, Length=161, Percent_Identity=35.4037267080745, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24645822, Length=161, Percent_Identity=35.4037267080745, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24663208, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI17647141, Length=191, Percent_Identity=30.3664921465969, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI22026816, Length=127, Percent_Identity=36.2204724409449, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 21370; Mature: 21370
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQG CCEEEEEEECCCCCCCCCHHHEECCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHCCCC ELVPLEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVS CEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC ENTAKERVLGRSRGADDNEMVFHNRMRVFLDPLGEIQNFYKNKKVYKAINGERSIEEIVH CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHH EMQEYILSFGN HHHHHHHHCCC >Mature Secondary Structure MKQLFLIIGAPGSGKTTDAELIAKNNSEKIAHFSTGDLLRAESAKKTERGLLIEKFTSQG CCEEEEEEECCCCCCCCCHHHEECCCCCCEEEECCCCHHHHHHHHHHHHCHHHHHHCCCC ELVPLEIVVETILSAIKSSDKGIILIDGYPRSVEQMQALDKELSAQNEVVLKSVIEVEVS CEEHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC ENTAKERVLGRSRGADDNEMVFHNRMRVFLDPLGEIQNFYKNKKVYKAINGERSIEEIVH CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHH EMQEYILSFGN HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA