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The map label for this gene is hydE [H]

Identifier: 188527516

GI number: 188527516

Start: 706964

End: 708502

Strand: Reverse

Name: hydE [H]

Synonym: HPSH_03690

Alternate gene names: 188527516

Gene position: 708502-706964 (Counterclockwise)

Preceding gene: 188527517

Following gene: 188527513

Centisome position: 44.05

GC content: 37.49

Gene sequence:

>1539_bases
TTGGCGTTTGTTTTTCTTTTTAAATGCGCTAATGAAGAAACAAGCCTGAATTTTACGCCCCTTTTAGAGCAAATGGCATG
CAATTTGCAAGCGCGTTTTTATAGCGTTTATAAGGATAATACCGCTTCTTTCTGCCTCCAAGCGAGCGCTGAAACCACTT
TAGAGTTCGCGCAAAAACTCAGCGAAATTCTGCCCTTTTCTTTGGATTTTAGCTTTTTGTCTTTAAAGGAAATCACAGAG
CCTTTAGATGAAAATCTTTTCCAAACAGCAAGCCTTTCAAAGCCCCTTTTTATGAACGCTAAAGAGCATCAAGATTTTTT
AGACAAAAATTCATCTTTGTATGCCAATGCGTTGGATTTTGTCAAAAACACCGCTTTTAAGGGGGCTATAATCCATAGCC
CTAAAGAGCTTATAGATTGCTTAACCCAATTAAAAGAGGCGCTCAAAACGCAAGATTTTATCCCTATTCACACTTCTAGG
GGGGTATTATCCCTTTCTTTAAAAAATCCCTCTCCAAGCGTTATTTTTAGCGATCTTTCTAGCGTTTTGAGCTGCACTAA
ATTGCCTTTAGAAGACGCTAAATATTTGGCGAGTTTGGAAAAACCCTCTATCAAAGCCTCTTTAAAAAGCGTCTTTAAGG
ACACTTTTAAAAACGATGAAATCATAGCCCAACTACCCTTTGACCCTATATTGAATTTATTGTGTCGTATTTTACAAGAT
GAGGGTATAGAATTTGTTTTTACCCATGCAAATAATTCACAAGAAGCGCTTTTGCATTATGAAACGCTTTTTAAAACCCC
TAAGCGCTTGATCACGCCCACTAAAAAATTCGTGCTAGAAAACAATCTCTCTGCCATTGCTTTTAAAGATGAATTAGAGT
TTTTAAAAGAAACCCCCCATTCTATCGTTTTGTATCTCAGCTTCAAGCGCCCTACAAGGTTGTTATTGCATGCTAATGGT
TCTTTAAAAACGCTTTTAAGCGTCAGTTTTGATTTCAACCAATCGTTTAACCTCCTCAAACAAGATGAAAAAGCCTCCAG
AATGCTAAAAAACTACGAGGCTAAATTCCCTAATTTTTACGCGCGCATTTTAGAGCTTTCTAAATACCAGCTAGGGGGTG
CGAATTTATTGGATTTTTTTCAAATTTTGGGGTTTGTTTTGGGTTATAGCGAGGATTTTTGCGCACAAAGCGTTATTTCT
TTGGCTAAAGAATGCTTACGCCCTAAAGGCCCTAGGATTGATTATAAAATCCTTAAAGACGATTCTTTTAAAATGGCTTT
AAACTTTTCAAAAATCATGCACAGTGCGATGAGTTTCAGGCTCGCAGGCGTGGAAAATGAAATTTTGAGTTTGGGGATTT
TGGATTCTTTAGCGGAGTTTTTAGGGAATTTCATTTGGGATAACGCGCAGAATTTTAGCGTCCAAGAAGTAACGATCGCT
GGGGATTTCTTTGGCGAAAAAGTGTTTTTGGATTTGTTTGTGCAATATTTCCCCAAAACCCTAGCCCTTAAAACGCATGC
ATTTTTGGATTATGAATAA

Upstream 100 bases:

>100_bases
GCCATAGAAACCCAACTCAACGCATGGGGAGTTCAAATGCAACGCACCGATCATATCGCCCTAGATTGTATCGCTGAACT
CTCTTATAAGGGTTTTTGAA

Downstream 100 bases:

>100_bases
GGGCTTAAAAGCGGATGTGCATCATCAACCCGCCGTCCATGTATTGGGTTTTTTTGCTTTTAGTCCTTTCAAAATAAGGC
CCAAAAGACAGAGCTTTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MAFVFLFKCANEETSLNFTPLLEQMACNLQARFYSVYKDNTASFCLQASAETTLEFAQKLSEILPFSLDFSFLSLKEITE
PLDENLFQTASLSKPLFMNAKEHQDFLDKNSSLYANALDFVKNTAFKGAIIHSPKELIDCLTQLKEALKTQDFIPIHTSR
GVLSLSLKNPSPSVIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKASLKSVFKDTFKNDEIIAQLPFDPILNLLCRILQD
EGIEFVFTHANNSQEALLHYETLFKTPKRLITPTKKFVLENNLSAIAFKDELEFLKETPHSIVLYLSFKRPTRLLLHANG
SLKTLLSVSFDFNQSFNLLKQDEKASRMLKNYEAKFPNFYARILELSKYQLGGANLLDFFQILGFVLGYSEDFCAQSVIS
LAKECLRPKGPRIDYKILKDDSFKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
GDFFGEKVFLDLFVQYFPKTLALKTHAFLDYE

Sequences:

>Translated_512_residues
MAFVFLFKCANEETSLNFTPLLEQMACNLQARFYSVYKDNTASFCLQASAETTLEFAQKLSEILPFSLDFSFLSLKEITE
PLDENLFQTASLSKPLFMNAKEHQDFLDKNSSLYANALDFVKNTAFKGAIIHSPKELIDCLTQLKEALKTQDFIPIHTSR
GVLSLSLKNPSPSVIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKASLKSVFKDTFKNDEIIAQLPFDPILNLLCRILQD
EGIEFVFTHANNSQEALLHYETLFKTPKRLITPTKKFVLENNLSAIAFKDELEFLKETPHSIVLYLSFKRPTRLLLHANG
SLKTLLSVSFDFNQSFNLLKQDEKASRMLKNYEAKFPNFYARILELSKYQLGGANLLDFFQILGFVLGYSEDFCAQSVIS
LAKECLRPKGPRIDYKILKDDSFKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
GDFFGEKVFLDLFVQYFPKTLALKTHAFLDYE
>Mature_511_residues
AFVFLFKCANEETSLNFTPLLEQMACNLQARFYSVYKDNTASFCLQASAETTLEFAQKLSEILPFSLDFSFLSLKEITEP
LDENLFQTASLSKPLFMNAKEHQDFLDKNSSLYANALDFVKNTAFKGAIIHSPKELIDCLTQLKEALKTQDFIPIHTSRG
VLSLSLKNPSPSVIFSDLSSVLSCTKLPLEDAKYLASLEKPSIKASLKSVFKDTFKNDEIIAQLPFDPILNLLCRILQDE
GIEFVFTHANNSQEALLHYETLFKTPKRLITPTKKFVLENNLSAIAFKDELEFLKETPHSIVLYLSFKRPTRLLLHANGS
LKTLLSVSFDFNQSFNLLKQDEKASRMLKNYEAKFPNFYARILELSKYQLGGANLLDFFQILGFVLGYSEDFCAQSVISL
AKECLRPKGPRIDYKILKDDSFKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIAG
DFFGEKVFLDLFVQYFPKTLALKTHAFLDYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58136; Mature: 58004

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFVFLFKCANEETSLNFTPLLEQMACNLQARFYSVYKDNTASFCLQASAETTLEFAQKL
CEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHHHH
SEILPFSLDFSFLSLKEITEPLDENLFQTASLSKPLFMNAKEHQDFLDKNSSLYANALDF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH
VKNTAFKGAIIHSPKELIDCLTQLKEALKTQDFIPIHTSRGVLSLSLKNPSPSVIFSDLS
HHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCHHHHHHH
SVLSCTKLPLEDAKYLASLEKPSIKASLKSVFKDTFKNDEIIAQLPFDPILNLLCRILQD
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
EGIEFVFTHANNSQEALLHYETLFKTPKRLITPTKKFVLENNLSAIAFKDELEFLKETPH
CCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCEEEEHHHHHHHHCCCC
SIVLYLSFKRPTRLLLHANGSLKTLLSVSFDFNQSFNLLKQDEKASRMLKNYEAKFPNFY
EEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ARILELSKYQLGGANLLDFFQILGFVLGYSEDFCAQSVISLAKECLRPKGPRIDYKILKD
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSFKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
CCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
GDFFGEKVFLDLFVQYFPKTLALKTHAFLDYE
CHHHHHHHHHHHHHHHCCHHHHEEHHEEECCC
>Mature Secondary Structure 
AFVFLFKCANEETSLNFTPLLEQMACNLQARFYSVYKDNTASFCLQASAETTLEFAQKL
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHEEECCHHHHHHHHHHH
SEILPFSLDFSFLSLKEITEPLDENLFQTASLSKPLFMNAKEHQDFLDKNSSLYANALDF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHH
VKNTAFKGAIIHSPKELIDCLTQLKEALKTQDFIPIHTSRGVLSLSLKNPSPSVIFSDLS
HHHHCCCCEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCHHHHHHH
SVLSCTKLPLEDAKYLASLEKPSIKASLKSVFKDTFKNDEIIAQLPFDPILNLLCRILQD
HHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHH
EGIEFVFTHANNSQEALLHYETLFKTPKRLITPTKKFVLENNLSAIAFKDELEFLKETPH
CCCEEEEEECCCCHHHHHHHHHHHHCCHHHHCCHHHHHHHCCCCEEEEHHHHHHHHCCCC
SIVLYLSFKRPTRLLLHANGSLKTLLSVSFDFNQSFNLLKQDEKASRMLKNYEAKFPNFY
EEEEEEEECCCEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
ARILELSKYQLGGANLLDFFQILGFVLGYSEDFCAQSVISLAKECLRPKGPRIDYKILKD
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
DSFKMALNFSKIMHSAMSFRLAGVENEILSLGILDSLAEFLGNFIWDNAQNFSVQEVTIA
CCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE
GDFFGEKVFLDLFVQYFPKTLALKTHAFLDYE
CHHHHHHHHHHHHHHHCCHHHHEEHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639603; 14500908; 1587288 [H]