| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527510
Identifier: 188527510
GI number: 188527510
Start: 702712
End: 702843
Strand: Reverse
Name: 188527510
Synonym: HPSH_03660
Alternate gene names: NA
Gene position: 702843-702712 (Counterclockwise)
Preceding gene: 188527511
Following gene: 188527509
Centisome position: 43.69
GC content: 37.88
Gene sequence:
>132_bases ATGCCAAGTCATGTTAATACCATAGTTTTGCATGGAAAAAGCGATGATGAAGTAGCGAGTTTGATGAATATGAGCGCTAT CGCTCCTTTTCAAAGCACAAGAGCTTTATTCTCAAGCAAAAATCCGGTTTAA
Upstream 100 bases:
>100_bases TTAGAACGCTTGGTGGAGTGGGTGAGGGATAGGGGTTATTGACTCGTTTTTTTTGCAATAATAACTGCGCCTTAAAAAAT ACAAAAACGGAGGTTTAATA
Downstream 100 bases:
>100_bases GCGCATTGGATATGGCAGCCGTTTATCATTATCGTTTATCATTATATTTTAATATTTTAGAAAAAGGAGATCAAAATGGA CAGAGAACAAGTGATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 42
Protein sequence:
>43_residues MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV
Sequences:
>Translated_43_residues MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV >Mature_42_residues PSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4629; Mature: 4498
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV CCCCCCEEEEECCCCHHHHHHHCCHHCCCCHHHHHHHCCCCCC >Mature Secondary Structure PSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV CCCCCEEEEECCCCHHHHHHHCCHHCCCCHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA