Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188527510

Identifier: 188527510

GI number: 188527510

Start: 702712

End: 702843

Strand: Reverse

Name: 188527510

Synonym: HPSH_03660

Alternate gene names: NA

Gene position: 702843-702712 (Counterclockwise)

Preceding gene: 188527511

Following gene: 188527509

Centisome position: 43.69

GC content: 37.88

Gene sequence:

>132_bases
ATGCCAAGTCATGTTAATACCATAGTTTTGCATGGAAAAAGCGATGATGAAGTAGCGAGTTTGATGAATATGAGCGCTAT
CGCTCCTTTTCAAAGCACAAGAGCTTTATTCTCAAGCAAAAATCCGGTTTAA

Upstream 100 bases:

>100_bases
TTAGAACGCTTGGTGGAGTGGGTGAGGGATAGGGGTTATTGACTCGTTTTTTTTGCAATAATAACTGCGCCTTAAAAAAT
ACAAAAACGGAGGTTTAATA

Downstream 100 bases:

>100_bases
GCGCATTGGATATGGCAGCCGTTTATCATTATCGTTTATCATTATATTTTAATATTTTAGAAAAAGGAGATCAAAATGGA
CAGAGAACAAGTGATTGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 43; Mature: 42

Protein sequence:

>43_residues
MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV

Sequences:

>Translated_43_residues
MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV
>Mature_42_residues
PSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4629; Mature: 4498

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV
CCCCCCEEEEECCCCHHHHHHHCCHHCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
PSHVNTIVLHGKSDDEVASLMNMSAIAPFQSTRALFSSKNPV
CCCCCEEEEECCCCHHHHHHHCCHHCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA