| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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Identifier: 188527507
GI number:
Start: 698518
End: 700200
Strand: Reverse
Name: Not Available
Synonym: HPSH_03635
Alternate gene names: NA
Gene position: NA
Preceding gene: 188527508
Following gene: 188527506
Centisome position: NA
GC content: NA
Gene sequence:
>1683_bases ATGCGTTTTTTTATTTTATTTTTTATCGGCATGCTTGGCGTTGGTTTTTCTCAAACTGAGTTCAATTTAAAAGATTTAGA AAAAAAGCCCGCTGGGATCGTTAGGGATTATTATTTATGGCGTTATATTAGCGATAAAAAAACCAGTTTAGAAAACGCCA AAAAAGCCTATGAATTGACTCAAAATAAAAACAGCACCCTGCAAAAGGCCATGCAAGAAAAAGGCTCAAACAATCCAGAA AAAAGCCCTGATGTTAAATTGCCTGAAGATATTTATTGCAAGCAAACGGCTTTAGAAAGCATGTTAGAAGAAACAGACAC TTTCCAAGCAAGCTGTATCGCTATCGCTTTAAAATCAAAAATCAAAGATTTTGATAAAATCCCCCTTCAAACCCTTAAGC CCTTACAAATTAAAATCAAAGAGGCTTACCCCGTTCTTTATGAAGAATTAGAAATTTTGCAAAGTAAGAATGTGAGCGCT TCTTTATTTAAGGCTAACGCGCAAGTGTTTAGCGCGCTTTTCAACCATTTGAGTTATGAAAAAAAGCTCCAAATTTTTGA AAAACATATCCCTATTAAAGAGTTAAACCGCCTTTTAGATGAAGATTACCCGGCGTTTAACCGCTTGATCTATCAGGTTA TTTTAGATCCTAAATTGGATCATTTTAAAGACGCTCTCACTAAAACTAACGCTACCCACAGCAACGCGCAAACCTTTTTT ATCCTAGGGATTAATGAAATCTTGCGCAAAAAACCCTCTAAAGCGCTCAAGTATTTTGAACGCTCAGAAGCGGTTATCAA GGACGATGATTTTTCAAAAGACAGAGCGGTTTTTTGGCAGTATTTAGTCTCTAAAAAGAAAAAAACTTTGGAACGCCTTT CACAAAGCCCTGCCTTAAACCTCTATAGTCTTTATGCGAGCCGCAAGCTCCAAACCACGCCCAGTTATCGCATCATTTCT CACATTCAAAATTTAAGCCAAGAAGCCCCTCCTTTTAACACTTATGACCCTTTTTCGTGGCAAATTTTTAAGGAAAAAAC CTTGAGTTTGAAAGATGAGGGCGCGTTTAATGCGATGCTAAAAAGCTTGTATTATGAAAAAAGCGCCCCTGAATTGACCT ATCTTTTAAGCCAACGCAATAAGGACAAGATTTATTATTATTTATCCCCTTATGAAGGCATTATTGAATGGCAAAATGTT GATGAAAAGGCTATGGCGTATGCGATCGCTAGGCAAGAAAGCTTCTTGCTCCCGGCAGTCATTTCGCGCTCGTTTGCTTT GGGGCTTATGCAAATCATGCCCTTTAATGTAGGGCCTTTCGCTAAAAGCCTTGGCATGGATAATGTTGATCTAAACGACA TGTTTAACCCCAATATCGCTCTCAAATTTGGTAATTATTACTTGAACCATCTGAAAAAAGAATTCAACCACCCCCTTTTT GTCGCCTACGCTTATAACGCTGGACCTGGGTTTTTAAGGAGGTGGCTAGAAAGCTCCAAACGATTTAAAGAAAAAAATCA TTTTGAGCCATGGCTTAGCATGGAGCTTATGCCTTATAGCGAAACCCGTTTGTATGGCTTTAGGGTCATGCGCAATTACT TGATTTATCAAGAAATTTTTGGGAATTTCATCCCTGTTGATGCATTTTTAGAACAAACTCTTAACTCAAAGGACAAACCA TGA
Upstream 100 bases:
>100_bases TGGATTTCGCTCCTTTAGTGGTGGTCATTGTTTTGAAATTTTTAGATTTAACTCTCATCCAATGGCTTTTTGCGCTCGCT AAAAGTCTTTAAAGAAAACC
Downstream 100 bases:
>100_bases TTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAATGCTG CCCATTGTGGATAAGCCTTT
Product: soluble lytic murein transglycosylase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>560_residues MRFFILFFIGMLGVGFSQTEFNLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSTLQKAMQEKGSNNPE KSPDVKLPEDIYCKQTALESMLEETDTFQASCIAIALKSKIKDFDKIPLQTLKPLQIKIKEAYPVLYEELEILQSKNVSA SLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALTKTNATHSNAQTFF ILGINEILRKKPSKALKYFERSEAVIKDDDFSKDRAVFWQYLVSKKKKTLERLSQSPALNLYSLYASRKLQTTPSYRIIS HIQNLSQEAPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNV DEKAMAYAIARQESFLLPAVISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEFNHPLF VAYAYNAGPGFLRRWLESSKRFKEKNHFEPWLSMELMPYSETRLYGFRVMRNYLIYQEIFGNFIPVDAFLEQTLNSKDKP
Sequences:
NA
Specific function: NA
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA