Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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Identifier: 188527507

GI number:

Start: 698518

End: 700200

Strand: Reverse

Name: Not Available

Synonym: HPSH_03635

Alternate gene names: NA

Gene position: NA

Preceding gene: 188527508

Following gene: 188527506

Centisome position: NA

GC content: NA

Gene sequence:

>1683_bases
ATGCGTTTTTTTATTTTATTTTTTATCGGCATGCTTGGCGTTGGTTTTTCTCAAACTGAGTTCAATTTAAAAGATTTAGA
AAAAAAGCCCGCTGGGATCGTTAGGGATTATTATTTATGGCGTTATATTAGCGATAAAAAAACCAGTTTAGAAAACGCCA
AAAAAGCCTATGAATTGACTCAAAATAAAAACAGCACCCTGCAAAAGGCCATGCAAGAAAAAGGCTCAAACAATCCAGAA
AAAAGCCCTGATGTTAAATTGCCTGAAGATATTTATTGCAAGCAAACGGCTTTAGAAAGCATGTTAGAAGAAACAGACAC
TTTCCAAGCAAGCTGTATCGCTATCGCTTTAAAATCAAAAATCAAAGATTTTGATAAAATCCCCCTTCAAACCCTTAAGC
CCTTACAAATTAAAATCAAAGAGGCTTACCCCGTTCTTTATGAAGAATTAGAAATTTTGCAAAGTAAGAATGTGAGCGCT
TCTTTATTTAAGGCTAACGCGCAAGTGTTTAGCGCGCTTTTCAACCATTTGAGTTATGAAAAAAAGCTCCAAATTTTTGA
AAAACATATCCCTATTAAAGAGTTAAACCGCCTTTTAGATGAAGATTACCCGGCGTTTAACCGCTTGATCTATCAGGTTA
TTTTAGATCCTAAATTGGATCATTTTAAAGACGCTCTCACTAAAACTAACGCTACCCACAGCAACGCGCAAACCTTTTTT
ATCCTAGGGATTAATGAAATCTTGCGCAAAAAACCCTCTAAAGCGCTCAAGTATTTTGAACGCTCAGAAGCGGTTATCAA
GGACGATGATTTTTCAAAAGACAGAGCGGTTTTTTGGCAGTATTTAGTCTCTAAAAAGAAAAAAACTTTGGAACGCCTTT
CACAAAGCCCTGCCTTAAACCTCTATAGTCTTTATGCGAGCCGCAAGCTCCAAACCACGCCCAGTTATCGCATCATTTCT
CACATTCAAAATTTAAGCCAAGAAGCCCCTCCTTTTAACACTTATGACCCTTTTTCGTGGCAAATTTTTAAGGAAAAAAC
CTTGAGTTTGAAAGATGAGGGCGCGTTTAATGCGATGCTAAAAAGCTTGTATTATGAAAAAAGCGCCCCTGAATTGACCT
ATCTTTTAAGCCAACGCAATAAGGACAAGATTTATTATTATTTATCCCCTTATGAAGGCATTATTGAATGGCAAAATGTT
GATGAAAAGGCTATGGCGTATGCGATCGCTAGGCAAGAAAGCTTCTTGCTCCCGGCAGTCATTTCGCGCTCGTTTGCTTT
GGGGCTTATGCAAATCATGCCCTTTAATGTAGGGCCTTTCGCTAAAAGCCTTGGCATGGATAATGTTGATCTAAACGACA
TGTTTAACCCCAATATCGCTCTCAAATTTGGTAATTATTACTTGAACCATCTGAAAAAAGAATTCAACCACCCCCTTTTT
GTCGCCTACGCTTATAACGCTGGACCTGGGTTTTTAAGGAGGTGGCTAGAAAGCTCCAAACGATTTAAAGAAAAAAATCA
TTTTGAGCCATGGCTTAGCATGGAGCTTATGCCTTATAGCGAAACCCGTTTGTATGGCTTTAGGGTCATGCGCAATTACT
TGATTTATCAAGAAATTTTTGGGAATTTCATCCCTGTTGATGCATTTTTAGAACAAACTCTTAACTCAAAGGACAAACCA
TGA

Upstream 100 bases:

>100_bases
TGGATTTCGCTCCTTTAGTGGTGGTCATTGTTTTGAAATTTTTAGATTTAACTCTCATCCAATGGCTTTTTGCGCTCGCT
AAAAGTCTTTAAAGAAAACC

Downstream 100 bases:

>100_bases
TTAAAAAATGCCTTTTTCCTGCCGCTGGCTACGGCACGCGCTTTTTGCCGATCACTAAAACCATTCCTAAAGAAATGCTG
CCCATTGTGGATAAGCCTTT

Product: soluble lytic murein transglycosylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>560_residues
MRFFILFFIGMLGVGFSQTEFNLKDLEKKPAGIVRDYYLWRYISDKKTSLENAKKAYELTQNKNSTLQKAMQEKGSNNPE
KSPDVKLPEDIYCKQTALESMLEETDTFQASCIAIALKSKIKDFDKIPLQTLKPLQIKIKEAYPVLYEELEILQSKNVSA
SLFKANAQVFSALFNHLSYEKKLQIFEKHIPIKELNRLLDEDYPAFNRLIYQVILDPKLDHFKDALTKTNATHSNAQTFF
ILGINEILRKKPSKALKYFERSEAVIKDDDFSKDRAVFWQYLVSKKKKTLERLSQSPALNLYSLYASRKLQTTPSYRIIS
HIQNLSQEAPPFNTYDPFSWQIFKEKTLSLKDEGAFNAMLKSLYYEKSAPELTYLLSQRNKDKIYYYLSPYEGIIEWQNV
DEKAMAYAIARQESFLLPAVISRSFALGLMQIMPFNVGPFAKSLGMDNVDLNDMFNPNIALKFGNYYLNHLKKEFNHPLF
VAYAYNAGPGFLRRWLESSKRFKEKNHFEPWLSMELMPYSETRLYGFRVMRNYLIYQEIFGNFIPVDAFLEQTLNSKDKP

Sequences:
NA

Specific function: NA

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA