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The map label for this gene is atoE [H]

Identifier: 188527459

GI number: 188527459

Start: 646676

End: 648040

Strand: Reverse

Name: atoE [H]

Synonym: HPSH_03385

Alternate gene names: 188527459

Gene position: 648040-646676 (Counterclockwise)

Preceding gene: 188527461

Following gene: 188527458

Centisome position: 40.29

GC content: 41.25

Gene sequence:

>1365_bases
ATGTTTTTATTAAGGCATTTGACTTCAGCGTGCGTGTTTTTAGCGTCTAAATGTTTGCCGGACTCCTTTGTCTTGGTCAC
TCTTTTATCGTTTATCGTGTTTATTCTTGTTTATGGTTTGACAGGGCAAGACGCTTTTTCTGTCATTTCTAGTTGGGGGA
ATGGCGCTTGGACGCTTTTAGGTTTTTCTATGCAAATGGCTCTTATTTTGGTGTTGGGTCAGGCTCTAGCTAGCGCTAAA
TTAGTCCAAAAACTTTTAAAATATCTGGCGTCTTTACCTAAAGGGTATTATACAGCTTTATTGTTGGTTACTTTTTTATC
ATTAATTGCTAATTGGATCAACTGGGGTTTTGGCTTAGTGATCAGCACGATTTTTGCAAAAGAGATCGCCAAAAATGTTA
AAGGGGTGGATTACAGGCTGCTTATTGCTAGCGCTTATTCGGGTTTTGTCATCTGGCATGGGGGTTTATCAGGCTCTATC
CCTTTAAGCGTTGCCACCCAAAATGAAGATCTATCCAAAATAAGCGCCGGGGTGATTGAAAAAGCTATTCCTATCAGTCA
GACGATTTTTTCTGCTTATAATTTAATCATCATAGGGATCATTCTTGTAGGGTTACCCTTTTTAATGGCAATAATCCACC
CTAAAAAGGAAGAAATTGTTGAGATTGACGCAAAGCTTTTAAAAAACGAATACAAGGAAACAGAACTCATTGATCACCAA
CAAGACAAAACGATCGCGCATTTTTTGGAAAACAGCGCTCTGCTTTCTTATCTTTTGGTTTTTTTGGGTTTTGGGTATCT
TGGTATTTATTTTTTTAAAGGAGGAGGGATTAGTTTAAACATTGTCAATACGATTTTCCTTTTTTTAGGGATTTTGCTCC
ATAAAACCCCTTTAGCTTATGTGAAAGCGATCAATCATTCCGCTAGGAGCGTGGCTGGGATTTTATTGCAATTCCCTTTT
TATGCTGGGATCATGGGGATGATGGCAAGCCATAGCGTGGGGGGTCATTCTTTAGCACAAATGCTTTCTTTAGCCTTCAC
GCACATCGCTAATGAAAAAACTTTCGCGCTCATGACTTTTTTGAGCGCGGGGATTGTCAATATTTTCATCCCGTCTGGCG
GAGGGCAATGGGCGATCCAAGCTCCTATCATGCTCCCGGCAGGGCAAAGTTTGGGCGTGGATCCGGGAGTGGTTTCTATG
GCTATCGCTTGGGGAGACGCTTGGACGAATATGATACAGCCTTTTTGGGCTTTGCCCGCTTTAGCCATTGCGGGTTTGGG
CGCTAAAGATATTATGGGCTATTGCGTTTTGACTTTAATTTTTGTCGCTTTGGTCGTGTGCGGGGTGTTTTATTTTTTAG
TGTGA

Upstream 100 bases:

>100_bases
GAAATTAGTGGAATTGCAAGAGGGTGTCAGCCTTGATCAAGTGAGAGAAAAAACAGAAGCTGAATTTGAAGTGTGCTTAT
AGCTTATAAGAGGGGTGTTG

Downstream 100 bases:

>100_bases
GTTTTTTATGCCTAAAACCACGCTCTTTTCAATGGGGTAAAATTTTCTCTTTTTACCCCTTAAACGCTCTTGTAATTAAG
CCTTATTTCGTTACAATAAC

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFILVYGLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALLLVTFLSLIANWINWGFGLVISTIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAIIHPKKEEIVEIDAKLLKNEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINHSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVALVVCGVFYFLV

Sequences:

>Translated_454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFILVYGLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALLLVTFLSLIANWINWGFGLVISTIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAIIHPKKEEIVEIDAKLLKNEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINHSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVALVVCGVFYFLV
>Mature_454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFILVYGLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALLLVTFLSLIANWINWGFGLVISTIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAIIHPKKEEIVEIDAKLLKNEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINHSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVALVVCGVFYFLV

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=431, Percent_Identity=46.6357308584687, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 49104; Mature: 49104

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFILVYGLTGQDAFSVISSWGNGAWTLL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHH
GFSMQMALILVLGQALASAKLVQKLLKYLASLPKGYYTALLLVTFLSLIANWINWGFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSIPLSVATQNEDLSKISAGVIE
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
KAIPISQTIFSAYNLIIIGIILVGLPFLMAIIHPKKEEIVEIDAKLLKNEYKETELIDHQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHCCHHHH
VKAINHSARSVAGILLQFPFYAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSMAIAWGDAWTNMIQPFWALPA
HHCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIAGLGAKDIMGYCVLTLIFVALVVCGVFYFLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFILVYGLTGQDAFSVISSWGNGAWTLL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEHHH
GFSMQMALILVLGQALASAKLVQKLLKYLASLPKGYYTALLLVTFLSLIANWINWGFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSIPLSVATQNEDLSKISAGVIE
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
KAIPISQTIFSAYNLIIIGIILVGLPFLMAIIHPKKEEIVEIDAKLLKNEYKETELIDHQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHCCHHHH
VKAINHSARSVAGILLQFPFYAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSMAIAWGDAWTNMIQPFWALPA
HHCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIAGLGAKDIMGYCVLTLIFVALVVCGVFYFLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]