| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527182
Identifier: 188527182
GI number: 188527182
Start: 373057
End: 373194
Strand: Direct
Name: 188527182
Synonym: HPSH_01945
Alternate gene names: NA
Gene position: 373057-373194 (Clockwise)
Preceding gene: 188527181
Following gene: 188527183
Centisome position: 23.19
GC content: 30.43
Gene sequence:
>138_bases GTGAGCGTTATTTTTACCAAGTCATATTTTTTTGACTACGACAAGCAAGAGATGATAGAAGCGGTAGGAATAGAAAAAGT CAGTTGCAATTTGCTTTGTTTTAAACAAAATATACTAGGAGATAACAATGAAAATTAA
Upstream 100 bases:
>100_bases GTAGCGATTAGACAATGACTTAAAAGAAATACTAATCAATAAACAGCACTATTATAGAGAGAAGTTTTTAATTTATTTTG GCAATCGTGGTGAGTATTTG
Downstream 100 bases:
>100_bases AGCGATCATGTTAGGATTGGTAATGAGCGGTGGGCTATTGTTAGCTAATGGTTAGCAACTTGTAGATAATTTCAAGGCGA TGGAAAAAGAAATTAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MSVIFTKSYFFDYDKQEMIEAVGIEKVSCNLLCFKQNILGDNNEN
Sequences:
>Translated_45_residues MSVIFTKSYFFDYDKQEMIEAVGIEKVSCNLLCFKQNILGDNNEN >Mature_44_residues SVIFTKSYFFDYDKQEMIEAVGIEKVSCNLLCFKQNILGDNNEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5240; Mature: 5109
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIFTKSYFFDYDKQEMIEAVGIEKVSCNLLCFKQNILGDNNEN CCEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure SVIFTKSYFFDYDKQEMIEAVGIEKVSCNLLCFKQNILGDNNEN CEEECCCCCCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA