| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is fliG
Identifier: 188527157
GI number: 188527157
Start: 343442
End: 344473
Strand: Direct
Name: fliG
Synonym: HPSH_01820
Alternate gene names: 188527157
Gene position: 343442-344473 (Clockwise)
Preceding gene: 188527156
Following gene: 188527158
Centisome position: 21.35
GC content: 41.57
Gene sequence:
>1032_bases ATGGCAACCAAGCTTACCCCCAAACAAAAGGCTCAATTAGACGAACTTTCCATGAGTGAAAAAATCGCTATTTTACTCAT TCAAGTGGGTGAAGACACCACAGGCGAGATTTTAAGGCATTTAGACATTGACTCTATTACAGAGATTTCTAAGCAAATCG TGCAATTAAACGGCACAGACAAGCAAATCGGTGCGGCGGTTTTAGAGGAGTTTTTTGCGATTTTTCAGTCTAACCAATAC ATCAATACCGGCGGTTTAGAATACGCTAGAGAGCTTTTAACCAGGACTTTAGGGAGCGAAGAAGCCAAAAAAGTGATGGA TAAACTCACTAAAAGCTTGCAAACGCAAAAAAACTTCGCTTATTTAGGCAAAATCAAGCCCCAACAACTCGCTGATTTCA TCATTAACGAACACCCTCAAACCATTGCCTTGATTTTAGCCCACATGGAAGCCCCTAATGCGGCTGAGACTTTGAGCTAT TTCCCTGATGAAATGAAAGCTGAGATTTCTATTAGAATGGCGAATTTAGGCGAAATATCGCCCCAAGTGGTTAAAAGGGT TTCCACGGTGTTAGAAAACAAACTAGAATCGCTCACTAGCTATAAAATTGAAGTGGGTGGTTTAAGAGCGGTGGCTGAAA TCTTTAACCGCTTAGGCCAAAAGAGCGCTAAAACCACGCTCGCTCGCATTGAAAGCGTGGATAACAAGCTCGCCGGCGCG ATTAAAGAGATGATGTTCACTTTTGAAGACATATCCAAACTAGACAATTTCGCTATCAGAGAGATTTTGAAAGTAGCGGA TAAAAAAGATTTGTCTTTGGCGCTAAAAACTTCTACCCAAGATTTAACCGATAAATTCTTAAACAACATGAGCAGCAGGG CTGCAGAGCAGTTTGTAGAAGAAATGCAGTATTTAGGGGCGGTCAAAATCAAAGATGTGGATGTGGCCCAAAGGAAAATC ATTGAAATCGTGCAGAGCTTGCAAGAAAAAGGCGTGATCCAAACCGGTGAAGAGGAAGATGTCATTGAATAG
Upstream 100 bases:
>100_bases TAAAGAGCGTCCTGATGAAATCGCAATGCTCTTTAAACTCCTAATCAAAGATGAAATTTCTTCAGACAGCGCGAAAGGCT AAAAAGATAAAAGGTTAAAA
Downstream 100 bases:
>100_bases CCGTAAAAACTTGATCCAAAAAGATCATTTGAATAAGCATGACATTCAAAAATACGAATTTAAGAGCATGGCAAACTTAC CCCCTACAACCAATCCTAAT
Product: flagellar motor switch protein G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI IEIVQSLQEKGVIQTGEEEDVIE
Sequences:
>Translated_343_residues MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI IEIVQSLQEKGVIQTGEEEDVIE >Mature_342_residues ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQYI NTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYF PDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAI KEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKII EIVQSLQEKGVIQTGEEEDVIE
Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f
COG id: COG1536
COG function: function code N; Flagellar motor switch protein
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FliG family [H]
Homologues:
Organism=Escherichia coli, GI1788249, Length=328, Percent_Identity=29.8780487804878, Blast_Score=167, Evalue=9e-43,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000090 - InterPro: IPR023087 - InterPro: IPR011002 [H]
Pfam domain/function: PF01706 FliG_C [H]
EC number: NA
Molecular weight: Translated: 38315; Mature: 38183
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD CCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1828465; 9384377 [H]