Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is fliG

Identifier: 188527157

GI number: 188527157

Start: 343442

End: 344473

Strand: Direct

Name: fliG

Synonym: HPSH_01820

Alternate gene names: 188527157

Gene position: 343442-344473 (Clockwise)

Preceding gene: 188527156

Following gene: 188527158

Centisome position: 21.35

GC content: 41.57

Gene sequence:

>1032_bases
ATGGCAACCAAGCTTACCCCCAAACAAAAGGCTCAATTAGACGAACTTTCCATGAGTGAAAAAATCGCTATTTTACTCAT
TCAAGTGGGTGAAGACACCACAGGCGAGATTTTAAGGCATTTAGACATTGACTCTATTACAGAGATTTCTAAGCAAATCG
TGCAATTAAACGGCACAGACAAGCAAATCGGTGCGGCGGTTTTAGAGGAGTTTTTTGCGATTTTTCAGTCTAACCAATAC
ATCAATACCGGCGGTTTAGAATACGCTAGAGAGCTTTTAACCAGGACTTTAGGGAGCGAAGAAGCCAAAAAAGTGATGGA
TAAACTCACTAAAAGCTTGCAAACGCAAAAAAACTTCGCTTATTTAGGCAAAATCAAGCCCCAACAACTCGCTGATTTCA
TCATTAACGAACACCCTCAAACCATTGCCTTGATTTTAGCCCACATGGAAGCCCCTAATGCGGCTGAGACTTTGAGCTAT
TTCCCTGATGAAATGAAAGCTGAGATTTCTATTAGAATGGCGAATTTAGGCGAAATATCGCCCCAAGTGGTTAAAAGGGT
TTCCACGGTGTTAGAAAACAAACTAGAATCGCTCACTAGCTATAAAATTGAAGTGGGTGGTTTAAGAGCGGTGGCTGAAA
TCTTTAACCGCTTAGGCCAAAAGAGCGCTAAAACCACGCTCGCTCGCATTGAAAGCGTGGATAACAAGCTCGCCGGCGCG
ATTAAAGAGATGATGTTCACTTTTGAAGACATATCCAAACTAGACAATTTCGCTATCAGAGAGATTTTGAAAGTAGCGGA
TAAAAAAGATTTGTCTTTGGCGCTAAAAACTTCTACCCAAGATTTAACCGATAAATTCTTAAACAACATGAGCAGCAGGG
CTGCAGAGCAGTTTGTAGAAGAAATGCAGTATTTAGGGGCGGTCAAAATCAAAGATGTGGATGTGGCCCAAAGGAAAATC
ATTGAAATCGTGCAGAGCTTGCAAGAAAAAGGCGTGATCCAAACCGGTGAAGAGGAAGATGTCATTGAATAG

Upstream 100 bases:

>100_bases
TAAAGAGCGTCCTGATGAAATCGCAATGCTCTTTAAACTCCTAATCAAAGATGAAATTTCTTCAGACAGCGCGAAAGGCT
AAAAAGATAAAAGGTTAAAA

Downstream 100 bases:

>100_bases
CCGTAAAAACTTGATCCAAAAAGATCATTTGAATAAGCATGACATTCAAAAATACGAATTTAAGAGCATGGCAAACTTAC
CCCCTACAACCAATCCTAAT

Product: flagellar motor switch protein G

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 342

Protein sequence:

>343_residues
MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY
INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY
FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA
IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI
IEIVQSLQEKGVIQTGEEEDVIE

Sequences:

>Translated_343_residues
MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQY
INTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSY
FPDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA
IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKI
IEIVQSLQEKGVIQTGEEEDVIE
>Mature_342_residues
ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTDKQIGAAVLEEFFAIFQSNQYI
NTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFAYLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYF
PDEMKAEISIRMANLGEISPQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGAI
KEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVEEMQYLGAVKIKDVDVAQRKII
EIVQSLQEKGVIQTGEEEDVIE

Specific function: One of the proteins that form a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of f

COG id: COG1536

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliG family [H]

Homologues:

Organism=Escherichia coli, GI1788249, Length=328, Percent_Identity=29.8780487804878, Blast_Score=167, Evalue=9e-43,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000090
- InterPro:   IPR023087
- InterPro:   IPR011002 [H]

Pfam domain/function: PF01706 FliG_C [H]

EC number: NA

Molecular weight: Translated: 38315; Mature: 38183

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD
CCCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH
KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC
PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE
HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ATKLTPKQKAQLDELSMSEKIAILLIQVGEDTTGEILRHLDIDSITEISKQIVQLNGTD
CCCCCCHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCH
KQIGAAVLEEFFAIFQSNQYINTGGLEYARELLTRTLGSEEAKKVMDKLTKSLQTQKNFA
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
YLGKIKPQQLADFIINEHPQTIALILAHMEAPNAAETLSYFPDEMKAEISIRMANLGEIS
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHEEEECCCCCCC
PQVVKRVSTVLENKLESLTSYKIEVGGLRAVAEIFNRLGQKSAKTTLARIESVDNKLAGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IKEMMFTFEDISKLDNFAIREILKVADKKDLSLALKTSTQDLTDKFLNNMSSRAAEQFVE
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH
EMQYLGAVKIKDVDVAQRKIIEIVQSLQEKGVIQTGEEEDVIE
HHHHHCCCEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]