| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527147
Identifier: 188527147
GI number: 188527147
Start: 334131
End: 334250
Strand: Direct
Name: 188527147
Synonym: HPSH_01770
Alternate gene names: NA
Gene position: 334131-334250 (Clockwise)
Preceding gene: 188527146
Following gene: 188527148
Centisome position: 20.77
GC content: 40.83
Gene sequence:
>120_bases ATGCTTGGGCATGTTGGGTTTATTGGGGTGAGGGATTATGGCAAGAGCCAAACCCTAAAGGAGCTTGTCCTTTTGGGTAT AAAGAGTTACAAAGATTTTTCTCAAGCTAAGGAATTTTGA
Upstream 100 bases:
>100_bases GAAATCTTGAAAGAATATTTGAACGAGAGCTGTATTTTGCTTGGAGAATAAGGAAGAGCGCCATGCTAAAAAGTTTCAAA AAAGCCTTTTTTAGGGCTTT
Downstream 100 bases:
>100_bases AAAAAAGGCTTGATGCGATCATGCTAAAAATCATGTTAGAAGGATTAATTTTTGTAAAGGAATGGGTTTGAGAATCAATC TTAAAATTTTGCCTTCTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 39
Protein sequence:
>39_residues MLGHVGFIGVRDYGKSQTLKELVLLGIKSYKDFSQAKEF
Sequences:
>Translated_39_residues MLGHVGFIGVRDYGKSQTLKELVLLGIKSYKDFSQAKEF >Mature_39_residues MLGHVGFIGVRDYGKSQTLKELVLLGIKSYKDFSQAKEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4404; Mature: 4404
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHVGFIGVRDYGKSQTLKELVLLGIKSYKDFSQAKEF CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure MLGHVGFIGVRDYGKSQTLKELVLLGIKSYKDFSQAKEF CCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA