| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527146
Identifier: 188527146
GI number: 188527146
Start: 333663
End: 334040
Strand: Direct
Name: 188527146
Synonym: HPSH_01765
Alternate gene names: NA
Gene position: 333663-334040 (Clockwise)
Preceding gene: 188527145
Following gene: 188527147
Centisome position: 20.74
GC content: 39.68
Gene sequence:
>378_bases ATGGTCATCTTGGATTTGAGCTACAATTTAGGTTTGAATGGGCTACTCAAATTCAAGCAATTCATCAAGGCCATAGAGGA TAAGAATTACGCTCTGGCTGTGGAGAGACTGCAAAAAAGCCCGTATTTCAATCAAGTGAGAAAAAGAGCGTCAAGGAATA TGGAGATTTTGAAATTGGGGGGTTGCGAAAAACATTGTAAGAAAAAATACACGATAGAAAAGGTGATCAAAGAGGTGGGG CTTGAGCTCAAATCAAAGTCGGTCATGCCGTATTTTTTCAACGAATACGATCTGATTAAAAACGCCAACAGAGAAGAGCC TGAGAGATTGAGAAGACAGGTAATATCTATTTTGATGAGAAGGGGCGAGAAATCTTGA
Upstream 100 bases:
>100_bases CCAAACCGCAGGCGTATGGGCTTTTAACTGACATATTAAAAGAGAATCATAAGGCCCTCCTCTCTTATGGGTGGTATAAA ATTTGGACGCAATGAGGAGA
Downstream 100 bases:
>100_bases AAGAATATTTGAACGAGAGCTGTATTTTGCTTGGAGAATAAGGAAGAGCGCCATGCTAAAAAGTTTCAAAAAAGCCTTTT TTAGGGCTTTATGCTTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS
Sequences:
>Translated_125_residues MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS >Mature_125_residues MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14772; Mature: 14772
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLG CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC GCEKHCKKKYTIEKVIKEVGLELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMR CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH RGEKS CCCCC >Mature Secondary Structure MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLG CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC GCEKHCKKKYTIEKVIKEVGLELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMR CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH RGEKS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA