Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527146

Identifier: 188527146

GI number: 188527146

Start: 333663

End: 334040

Strand: Direct

Name: 188527146

Synonym: HPSH_01765

Alternate gene names: NA

Gene position: 333663-334040 (Clockwise)

Preceding gene: 188527145

Following gene: 188527147

Centisome position: 20.74

GC content: 39.68

Gene sequence:

>378_bases
ATGGTCATCTTGGATTTGAGCTACAATTTAGGTTTGAATGGGCTACTCAAATTCAAGCAATTCATCAAGGCCATAGAGGA
TAAGAATTACGCTCTGGCTGTGGAGAGACTGCAAAAAAGCCCGTATTTCAATCAAGTGAGAAAAAGAGCGTCAAGGAATA
TGGAGATTTTGAAATTGGGGGGTTGCGAAAAACATTGTAAGAAAAAATACACGATAGAAAAGGTGATCAAAGAGGTGGGG
CTTGAGCTCAAATCAAAGTCGGTCATGCCGTATTTTTTCAACGAATACGATCTGATTAAAAACGCCAACAGAGAAGAGCC
TGAGAGATTGAGAAGACAGGTAATATCTATTTTGATGAGAAGGGGCGAGAAATCTTGA

Upstream 100 bases:

>100_bases
CCAAACCGCAGGCGTATGGGCTTTTAACTGACATATTAAAAGAGAATCATAAGGCCCTCCTCTCTTATGGGTGGTATAAA
ATTTGGACGCAATGAGGAGA

Downstream 100 bases:

>100_bases
AAGAATATTTGAACGAGAGCTGTATTTTGCTTGGAGAATAAGGAAGAGCGCCATGCTAAAAAGTTTCAAAAAAGCCTTTT
TTAGGGCTTTATGCTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG
LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS

Sequences:

>Translated_125_residues
MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG
LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS
>Mature_125_residues
MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLGGCEKHCKKKYTIEKVIKEVG
LELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMRRGEKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14772; Mature: 14772

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLG
CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GCEKHCKKKYTIEKVIKEVGLELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMR
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
RGEKS
CCCCC
>Mature Secondary Structure
MVILDLSYNLGLNGLLKFKQFIKAIEDKNYALAVERLQKSPYFNQVRKRASRNMEILKLG
CEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEC
GCEKHCKKKYTIEKVIKEVGLELKSKSVMPYFFNEYDLIKNANREEPERLRRQVISILMR
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHCHHHHHHCCCCCCHHHHHHHHHHHHHH
RGEKS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA