Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527144

Identifier: 188527144

GI number: 188527144

Start: 332831

End: 333397

Strand: Direct

Name: 188527144

Synonym: HPSH_01755

Alternate gene names: NA

Gene position: 332831-333397 (Clockwise)

Preceding gene: 188527143

Following gene: 188527145

Centisome position: 20.69

GC content: 42.68

Gene sequence:

>567_bases
ATGAGCAAGAAAGATAGTTTCATCTCTAGCGTGATGGGGTTTTTTAGCGAAAAGAATGAGCGCTGGCTCTTAGCCCATAG
GCACACGAGAGGGTTTGTGATCGTGGCGTGGCTTTTTCGGTTTAAAAGCATTGCGTTTTCTATTTTGATCACTCTATTAG
TGATTTTGGTGGATATTTGGGTGTATAGCGATGTGCGCCAATTCTTGCTAGACACCGCCAGCTCGCCTATTTTGCTTTTA
ATCGCTTTGTTAATCAAGTGGGGCGTGATTGTCATAAGCGTGCGCCAATGCTATAAGTTCAGCCAAAAAATGTTTGCACT
CATCCAAAAAAAAAGGCAAATCAGAGAGAGTTTGAAAAAGCGCTCCCACCAACAAGAGGGTAAAACTCCCCCAAAAGAAA
GGCTCTCTAGCGTTACTGAAGAAATTATCGCCAAAAAGCAAGAAGAAACCCAACGCCAAGAAACCCCAGAGGGCAAGCAT
GATGGAGAGAGGCTCTCTAGCGTTACTGAAGAAATCATTTCAAAAAAACTAGAAGAATTGAAAGCCAAGAATAATAAGGG
CAGCTAA

Upstream 100 bases:

>100_bases
GAAGAAAAGAGGCTCTTGGAGCAGATCCACGCCAAAGAATCTGAAGAAAACCAAGAAAAGAGTGTTAAGCATTTCAAAGA
AGTTTGGGAAAAGGGCGATA

Downstream 100 bases:

>100_bases
AAGGGTGTTATATGCTCTGTCTTAGCAAATTGATCCTAGCGGCGCCGTTTTTGATAGTGGATTCAGAGGGGTTTTCGCCT
TCCGTTTATACCGACAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MSKKDSFISSVMGFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLVILVDIWVYSDVRQFLLDTASSPILLL
IALLIKWGVIVISVRQCYKFSQKMFALIQKKRQIRESLKKRSHQQEGKTPPKERLSSVTEEIIAKKQEETQRQETPEGKH
DGERLSSVTEEIISKKLEELKAKNNKGS

Sequences:

>Translated_188_residues
MSKKDSFISSVMGFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLVILVDIWVYSDVRQFLLDTASSPILLL
IALLIKWGVIVISVRQCYKFSQKMFALIQKKRQIRESLKKRSHQQEGKTPPKERLSSVTEEIIAKKQEETQRQETPEGKH
DGERLSSVTEEIISKKLEELKAKNNKGS
>Mature_187_residues
SKKDSFISSVMGFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLVILVDIWVYSDVRQFLLDTASSPILLLI
ALLIKWGVIVISVRQCYKFSQKMFALIQKKRQIRESLKKRSHQQEGKTPPKERLSSVTEEIIAKKQEETQRQETPEGKHD
GERLSSVTEEIISKKLEELKAKNNKGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21834; Mature: 21703

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKDSFISSVMGFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLVILVDIW
CCCHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYSDVRQFLLDTASSPILLLIALLIKWGVIVISVRQCYKFSQKMFALIQKKRQIRESLKK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSHQQEGKTPPKERLSSVTEEIIAKKQEETQRQETPEGKHDGERLSSVTEEIISKKLEEL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KAKNNKGS
HHCCCCCC
>Mature Secondary Structure 
SKKDSFISSVMGFFSEKNERWLLAHRHTRGFVIVAWLFRFKSIAFSILITLLVILVDIW
CCHHHHHHHHHHHHHCCCCCEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYSDVRQFLLDTASSPILLLIALLIKWGVIVISVRQCYKFSQKMFALIQKKRQIRESLKK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSHQQEGKTPPKERLSSVTEEIIAKKQEETQRQETPEGKHDGERLSSVTEEIISKKLEEL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KAKNNKGS
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA