Definition | Helicobacter pylori Shi470, complete genome. |
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Accession | NC_010698 |
Length | 1,608,548 |
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The map label for this gene is 188527143
Identifier: 188527143
GI number: 188527143
Start: 332509
End: 332847
Strand: Direct
Name: 188527143
Synonym: HPSH_01750
Alternate gene names: NA
Gene position: 332509-332847 (Clockwise)
Preceding gene: 188527142
Following gene: 188527144
Centisome position: 20.67
GC content: 37.76
Gene sequence:
>339_bases ATGAAAATCATGCATCAAGTTATGGATTTTTTAGATTCTTGCAAACAAACGATCCAAAAAAATTCTAACGAAGCGCTCCA AAAGACCAAGCGGGCGCTCTTCAAGGAAAAATCTCAAAAGATCAGAGAGCAAGCGGTTAAAATCGTGGAAAAACGCTTGA AAAAAGAGGGCATGAAATTGAGCGATTTCAATGAAGAAGAATTAAAAATCATGTTTGAAGCCGAAGAAAAGAGGCTCTTG GAGCAGATCCACGCCAAAGAATCTGAAGAAAACCAAGAAAAGAGTGTTAAGCATTTCAAAGAAGTTTGGGAAAAGGGCGA TAATGAGCAAGAAAGATAG
Upstream 100 bases:
>100_bases TCTTCTTAAGAAGGCATTTTACTAGAGAGTTTTAATCTTTTTTTGGTATTCTTTTAGGGTGATAATAAGCGGACTTTAAT ACCTTTAAAAACGGACAATC
Downstream 100 bases:
>100_bases TTTCATCTCTAGCGTGATGGGGTTTTTTAGCGAAAAGAATGAGCGCTGGCTCTTAGCCCATAGGCACACGAGAGGGTTTG TGATCGTGGCGTGGCTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKIMHQVMDFLDSCKQTIQKNSNEALQKTKRALFKEKSQKIREQAVKIVEKRLKKEGMKLSDFNEEELKIMFEAEEKRLL EQIHAKESEENQEKSVKHFKEVWEKGDNEQER
Sequences:
>Translated_112_residues MKIMHQVMDFLDSCKQTIQKNSNEALQKTKRALFKEKSQKIREQAVKIVEKRLKKEGMKLSDFNEEELKIMFEAEEKRLL EQIHAKESEENQEKSVKHFKEVWEKGDNEQER >Mature_112_residues MKIMHQVMDFLDSCKQTIQKNSNEALQKTKRALFKEKSQKIREQAVKIVEKRLKKEGMKLSDFNEEELKIMFEAEEKRLL EQIHAKESEENQEKSVKHFKEVWEKGDNEQER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13496; Mature: 13496
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMHQVMDFLDSCKQTIQKNSNEALQKTKRALFKEKSQKIREQAVKIVEKRLKKEGMKL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDFNEEELKIMFEAEEKRLLEQIHAKESEENQEKSVKHFKEVWEKGDNEQER CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKIMHQVMDFLDSCKQTIQKNSNEALQKTKRALFKEKSQKIREQAVKIVEKRLKKEGMKL CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SDFNEEELKIMFEAEEKRLLEQIHAKESEENQEKSVKHFKEVWEKGDNEQER CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA