Definition | Helicobacter pylori Shi470, complete genome. |
---|---|
Accession | NC_010698 |
Length | 1,608,548 |
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The map label for this gene is ilvC [H]
Identifier: 188527136
GI number: 188527136
Start: 328458
End: 329450
Strand: Direct
Name: ilvC [H]
Synonym: HPSH_01715
Alternate gene names: 188527136
Gene position: 328458-329450 (Clockwise)
Preceding gene: 188527133
Following gene: 188527137
Centisome position: 20.42
GC content: 41.59
Gene sequence:
>993_bases TTGGCATTACCCGTTTATTATGATAAAGACATTGATTTAGGCGTTATCCAATCCTTACAAGTGGGTATTATCGGCTATGG CGCGCAAGGAGAAGCCCAAGCGCTCAATTTGAGAGACTCTAAAGTAAAAGTGCGTATTGGCTTGTATCAAGGGAGTTTGA GCGTTCCAAAAGCAAAAGCAGAGGGCTTTGAGGTGCTAGAAGTCAAAGAATTAGTCCAACAATCTGATCTGATCATGGCA CTTCTTCCGGACGAATTGCATAAGGAAGTGTTAGAAAAAGAAGTGATCCCTTTTTTAAAAGAGGGGCAAATTGTGGGCTT TGCCCATGGCTTTAGCGTGCATTTCAATCAGGTTGTTCTCCCAAAAGGCGTGGGCGCGATTTTAGTCGCGCCAAAAGGGC CCGGGAGCGCTTTAAGAGAAGAATACCTTAAAAATAGGGGTTTATACCATTTGATCGCCATAGAGCAAGAAAGCTCAAAA AATAACGCTAAAGCGGTGGCTTTAAGCTATGCTAAAGCGATGGGCGGGGGGAGAATGGGGGTTTTAGAAACGAGCTTTAA AGAAGAATGCGAGAGCGATTTATTCGGCGAGCAAGCGGTTTTGTGCGGAGGGTTAGAAGCGATTATTAGGATGGGATTTG AAACTTTAATTAAGGCAGGATACCCTGAAGAATTAGCCTATTTTGAATGCGTGCATGAAGTGAAATTAGTGGCGGATTTA TTGCATTATAAGGGGGTAGAGGGCTTAAGGAAACACATTTCTAACACCGCTGAATTTGGAGCGATTAAAAATAGAGAGCC TATGGGAAATCTGCTAGAAAAACGCATGCAAAAAATCTTAAAAAAGATTCAAAACGGCTCATTCGCTAAGGATTTTTTAC TGGAAAAGAGTTTGAATTACCCCAGGTTAAACACAGAGAGGAAAGCCCTTAAAGAGACTAAAATAGAACAAATTGGGGAA ATTTTACGCGCCCCATTCAATCATAAAAAATAA
Upstream 100 bases:
>100_bases CCTCCGAGCACACCATTTTTTAATTCTGCATGTTTTTAAACATTATCGCTCCCATTATGGTAAAATAAATACTTGCTTAA ACACGCTAGGAGATTTGATT
Downstream 100 bases:
>100_bases ATCATTAAAAGGAATTATATGGCAATAGTAGTTACTATCACTTCAGGTAAGGGGGGCGTGGGTAAAAGCACCACCGCGGC TAATTTAGCGATCGGCTTGG
Product: ketol-acid reductoisomerase
Products: NA
Alternate protein names: Acetohydroxy-acid isomeroreductase; Alpha-keto-beta-hydroxylacil reductoisomerase [H]
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVKVRIGLYQGSLSVPKAKAEGFEVLEVKELVQQSDLIMA LLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSK NNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIKAGYPEELAYFECVHEVKLVADL LHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGE ILRAPFNHKK
Sequences:
>Translated_330_residues MALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVKVRIGLYQGSLSVPKAKAEGFEVLEVKELVQQSDLIMA LLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSK NNAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIKAGYPEELAYFECVHEVKLVADL LHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGE ILRAPFNHKK >Mature_329_residues ALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVKVRIGLYQGSLSVPKAKAEGFEVLEVKELVQQSDLIMAL LPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVLPKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSKN NAKAVALSYAKAMGGGRMGVLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIKAGYPEELAYFECVHEVKLVADLL HYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNYPRLNTERKALKETKIEQIGEI LRAPFNHKK
Specific function: Valine and isoleucine biosynthesis; second step. [C]
COG id: COG0059
COG function: function code EH; Ketol-acid reductoisomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ketol-acid reductoisomerase family [H]
Homologues:
Organism=Escherichia coli, GI1790210, Length=311, Percent_Identity=33.7620578778135, Blast_Score=153, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323387, Length=300, Percent_Identity=29.3333333333333, Blast_Score=109, Evalue=7e-25,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013023 - InterPro: IPR000506 - InterPro: IPR013328 - InterPro: IPR013116 [H]
Pfam domain/function: PF01450 IlvC; PF07991 IlvN [H]
EC number: =1.1.1.86 [H]
Molecular weight: Translated: 36579; Mature: 36448
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVKVRIGLYQGSLSVPKAKA CCCCCEECCCCCHHHHHHHEECEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCC EGFEVLEVKELVQQSDLIMALLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVL CCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHCCCEEEEECCCEEEECEEEE PKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSKNNAKAVALSYAKAMGGGRMG CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIKAGYPEELAYFECVHEVKLVADL EECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNY HHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC PRLNTERKALKETKIEQIGEILRAPFNHKK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ALPVYYDKDIDLGVIQSLQVGIIGYGAQGEAQALNLRDSKVKVRIGLYQGSLSVPKAKA CCCCEECCCCCHHHHHHHEECEEEECCCCCCEEECCCCCEEEEEEEEEECCCCCCCCCC EGFEVLEVKELVQQSDLIMALLPDELHKEVLEKEVIPFLKEGQIVGFAHGFSVHFNQVVL CCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHCCCEEEEECCCEEEECEEEE PKGVGAILVAPKGPGSALREEYLKNRGLYHLIAIEQESSKNNAKAVALSYAKAMGGGRMG CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VLETSFKEECESDLFGEQAVLCGGLEAIIRMGFETLIKAGYPEELAYFECVHEVKLVADL EECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LHYKGVEGLRKHISNTAEFGAIKNREPMGNLLEKRMQKILKKIQNGSFAKDFLLEKSLNY HHHCCHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC PRLNTERKALKETKIEQIGEILRAPFNHKK CCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA