| Definition | Helicobacter pylori Shi470, complete genome. |
|---|---|
| Accession | NC_010698 |
| Length | 1,608,548 |
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The map label for this gene is 188527121
Identifier: 188527121
GI number: 188527121
Start: 317180
End: 317260
Strand: Direct
Name: 188527121
Synonym: HPSH_01640
Alternate gene names: NA
Gene position: 317180-317260 (Clockwise)
Preceding gene: 188527119
Following gene: 188527128
Centisome position: 19.72
GC content: 27.16
Gene sequence:
>81_bases TTGGAAAAATTTTGTCATTTTTTTGCTTTTGATGCTTTTTGTTTGGTGTTAGCCCATAAAAAGGCTTTTAGCATTTTTTA A
Upstream 100 bases:
>100_bases AGGCTTCTTGCGGTATCATTGCTGAAACAGACGCTAATAACTATGGGCTAGGCTTAAAAAGAGCATCACTGAATAGCATG AAAGCGTTTTTTTTGTCATT
Downstream 100 bases:
>100_bases GAGTTAATAGTAAAGGGCTTGACTTTGCCGTAACCTCTTTAAAAAGAGATCTTTTGGGGCGTTTGCCCCTTATGAGTGAG AAAGTTTATTTCTTGTGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 26; Mature: 26
Protein sequence:
>26_residues MEKFCHFFAFDAFCLVLAHKKAFSIF
Sequences:
>Translated_26_residues MEKFCHFFAFDAFCLVLAHKKAFSIF >Mature_26_residues MEKFCHFFAFDAFCLVLAHKKAFSIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3099; Mature: 3099
Theoretical pI: Translated: 8.25; Mature: 8.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFCHFFAFDAFCLVLAHKKAFSIF CCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEKFCHFFAFDAFCLVLAHKKAFSIF CCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA