Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527114

Identifier: 188527114

GI number: 188527114

Start: 310158

End: 310562

Strand: Direct

Name: 188527114

Synonym: HPSH_01595

Alternate gene names: NA

Gene position: 310158-310562 (Clockwise)

Preceding gene: 188527113

Following gene: 188527115

Centisome position: 19.28

GC content: 37.04

Gene sequence:

>405_bases
ATGTGCCAAATCAAATGCTTGCTTATTTTACTTTCTATCAATATAGTTAGCGCGATCATCGTTTATTTTTTCCAAGCATT
TCAAGGGGTTTTGAATTTTGAAGGGGGGTTTTTAGGGTTTTTTATCGTGGCGTTGTCTTCGTATTACGGCGTTAAAAAGC
GTTTGGATTTAAGGAAACAAAATTCAGGAGAAAAAGAAGAAAAGCAAAAATTCCAAAAATTCGCCTTGGGCTTGGAAATG
TCTTTTAATGTGTGGCGTTTAGGGGGGTATGGGGTTTTACTGGGCATTTTAGGAGCGCTTTTATTCTTGCATCTTTTTAA
CGGGTTAATCTTTCTTATTGGCGTGTTTGTGAGCTCGCTCTCTAGCGCGCTATTACGATTTTTGAATAATAATGGTAAGT
TTTGA

Upstream 100 bases:

>100_bases
TCTCAATGTCTATAAAGCTTATAGAAACATGCAAAAAGATTATGAAGAATTGGCCAAAGACCCTAAACACACACAAAACA
AGTAAATACAATAAAAGCCC

Downstream 100 bases:

>100_bases
CACAAACTCGTATGGATTTTAACCCCATTAATCCTCTTTTAATTTCTAATCCTATACAATAAAAACAAAAATGGGAGTGG
ATCTTGAAAACAAAAAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MCQIKCLLILLSINIVSAIIVYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQNSGEKEEKQKFQKFALGLEM
SFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSLSSALLRFLNNNGKF

Sequences:

>Translated_134_residues
MCQIKCLLILLSINIVSAIIVYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQNSGEKEEKQKFQKFALGLEM
SFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSLSSALLRFLNNNGKF
>Mature_134_residues
MCQIKCLLILLSINIVSAIIVYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQNSGEKEEKQKFQKFALGLEM
SFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSLSSALLRFLNNNGKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15044; Mature: 15044

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQIKCLLILLSINIVSAIIVYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NSGEKEEKQKFQKFALGLEMSFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSL
CCCCHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSALLRFLNNNGKF
HHHHHHHHHCCCCC
>Mature Secondary Structure
MCQIKCLLILLSINIVSAIIVYFFQAFQGVLNFEGGFLGFFIVALSSYYGVKKRLDLRKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
NSGEKEEKQKFQKFALGLEMSFNVWRLGGYGVLLGILGALLFLHLFNGLIFLIGVFVSSL
CCCCHHHHHHHHHHHHHHHCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SSALLRFLNNNGKF
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA