Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

Click here to switch to the map view.

The map label for this gene is 188527113

Identifier: 188527113

GI number: 188527113

Start: 309885

End: 310142

Strand: Direct

Name: 188527113

Synonym: HPSH_01590

Alternate gene names: NA

Gene position: 309885-310142 (Clockwise)

Preceding gene: 188527112

Following gene: 188527114

Centisome position: 19.26

GC content: 39.15

Gene sequence:

>258_bases
TTGAAAAAGCCAAAGTATTATAAATTCATAGAGGGGGCGAATTATTTGAGCTTGGGGCTTTCTATGGTGGTAGCGATCCT
TATGGGCGTGGCTATAGGTTATGGGCTTAAAAAGCTCACTCATATTTCATGGCTTTTTTGGCTTGGGGTTATTTGGGGCG
TGTTAGCGAGCTTTCTCAATGTCTATAAAGCTTATAGAAACATGCAAAAAGATTATGAAGAATTGGCCAAAGACCCTAAA
CACACACAAAACAAGTAA

Upstream 100 bases:

>100_bases
ACCGGCTTTATTTGTGAGCCTATGACTGAAGAGATGATTGATTTAGCGGTTGCAAAAGCCGATGAAAGTTTTGATGAAAT
CATAAAAGGTGTGTGAATTT

Downstream 100 bases:

>100_bases
ATACAATAAAAGCCCATGTGCCAAATCAAATGCTTGCTTATTTTACTTTCTATCAATATAGTTAGCGCGATCATCGTTTA
TTTTTTCCAAGCATTTCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MKKPKYYKFIEGANYLSLGLSMVVAILMGVAIGYGLKKLTHISWLFWLGVIWGVLASFLNVYKAYRNMQKDYEELAKDPK
HTQNK

Sequences:

>Translated_85_residues
MKKPKYYKFIEGANYLSLGLSMVVAILMGVAIGYGLKKLTHISWLFWLGVIWGVLASFLNVYKAYRNMQKDYEELAKDPK
HTQNK
>Mature_85_residues
MKKPKYYKFIEGANYLSLGLSMVVAILMGVAIGYGLKKLTHISWLFWLGVIWGVLASFLNVYKAYRNMQKDYEELAKDPK
HTQNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9832; Mature: 9832

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPKYYKFIEGANYLSLGLSMVVAILMGVAIGYGLKKLTHISWLFWLGVIWGVLASFLN
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYKAYRNMQKDYEELAKDPKHTQNK
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKKPKYYKFIEGANYLSLGLSMVVAILMGVAIGYGLKKLTHISWLFWLGVIWGVLASFLN
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYKAYRNMQKDYEELAKDPKHTQNK
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA