Definition Helicobacter pylori Shi470, complete genome.
Accession NC_010698
Length 1,608,548

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The map label for this gene is 188527110

Identifier: 188527110

GI number: 188527110

Start: 306781

End: 307776

Strand: Direct

Name: 188527110

Synonym: HPSH_01575

Alternate gene names: NA

Gene position: 306781-307776 (Clockwise)

Preceding gene: 188527109

Following gene: 188527111

Centisome position: 19.07

GC content: 42.47

Gene sequence:

>996_bases
ATGAAAAGATTTGTTTTGTTTTTATTGTTCATGGGTGTTTGCGTTTGCGTTCAAGCTCATGCCGAGCAGGATTACTTTTT
TAGGGATTTTAAATCTACAGACTTGCCCCAAAAACTCCATCTTGATAAAAAGCTCTCCCAAACAATACAGCCATGCGCGC
AACTTAACGCATCAAAACACTACACTTCTGCTGGGGTTAGAGAGCCTGATGCATGCACAAAGAGTTTTAAAAAATCCGCT
ATCATGTCCTATGACTTAGCGCTAGGCTATTTAGTGAGCAAAAACAAACAATACGGCTTAAAGGCTATAGAAATTTTAAA
CGCTTGGGCTAAAGAGCTTCAAAGCGTGGATACTTATCAGAGTGAGGACAATATCAATTTTTACATGCCTTATATGAACA
TGGCTTATTGGTTTGTCAAAAAGGCGTTTCCTAGCCCAGAATATGAAGATTTTATTAAGCGGATGCACCAGTATTCGCAA
TCAGCTCTTAACACTAACCATGGGGCGTGGGGCATTCTCTTTGATGTGAGCTCTGCGCTAGCGTTAGATGATCATGCCCT
ATTGCAAAACAGCGCTAATCGGTGGCAAGAGTGGGTGTTTAAAGCCATAGATGAGAATGGGGTTATTCCTAGCGCGATCA
CTAGGAGCGATACGAGCGATTATCATGGTGGCCCTACAAAAGGCATTAAGGGGATAGCTTATACCAATTTTGCGCTTCTT
GCGCTGACTGTATCAGGCGAATTGCTTTTTGAGAATGGGTATGATTTGTGGGGTAGTGGAGCCGGGAAAAGGCTCTCTGT
GGCGTATAACAAAGTTGCAACATGGATTTTAAACCCTGAAACTTTCCCTTATTTCCAGCCTAACCTTATCGGGGTGCATA
ACAACGCCTATTTCATTATTTTAGCCAAGCATTATTCTAGCCCTAGTGCGGATGAGCTTTTAAAGCAAGGCGATTTACAC
GAAGATGGTTTCAGGCTGAAACTCCGATCGCTGTGA

Upstream 100 bases:

>100_bases
CGCTTAGCGCTCTTAATACGCATGCACTTAAATTTGTGTTGTTGGAAGCGTTACCATAAAACGCTATTTTTAGATCAATC
CATTAAAATAAAGGCGAGAA

Downstream 100 bases:

>100_bases
ATTTTTCTGTATTTAAGGTTATAGCCTTAAGGGTAGCTCCATGCGCTTTAACCTTTTTATGAATGGTTTAGAAAGTTTGG
TTCAGTTAGCATTATTTACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MKRFVLFLLFMGVCVCVQAHAEQDYFFRDFKSTDLPQKLHLDKKLSQTIQPCAQLNASKHYTSAGVREPDACTKSFKKSA
IMSYDLALGYLVSKNKQYGLKAIEILNAWAKELQSVDTYQSEDNINFYMPYMNMAYWFVKKAFPSPEYEDFIKRMHQYSQ
SALNTNHGAWGILFDVSSALALDDHALLQNSANRWQEWVFKAIDENGVIPSAITRSDTSDYHGGPTKGIKGIAYTNFALL
ALTVSGELLFENGYDLWGSGAGKRLSVAYNKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH
EDGFRLKLRSL

Sequences:

>Translated_331_residues
MKRFVLFLLFMGVCVCVQAHAEQDYFFRDFKSTDLPQKLHLDKKLSQTIQPCAQLNASKHYTSAGVREPDACTKSFKKSA
IMSYDLALGYLVSKNKQYGLKAIEILNAWAKELQSVDTYQSEDNINFYMPYMNMAYWFVKKAFPSPEYEDFIKRMHQYSQ
SALNTNHGAWGILFDVSSALALDDHALLQNSANRWQEWVFKAIDENGVIPSAITRSDTSDYHGGPTKGIKGIAYTNFALL
ALTVSGELLFENGYDLWGSGAGKRLSVAYNKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH
EDGFRLKLRSL
>Mature_331_residues
MKRFVLFLLFMGVCVCVQAHAEQDYFFRDFKSTDLPQKLHLDKKLSQTIQPCAQLNASKHYTSAGVREPDACTKSFKKSA
IMSYDLALGYLVSKNKQYGLKAIEILNAWAKELQSVDTYQSEDNINFYMPYMNMAYWFVKKAFPSPEYEDFIKRMHQYSQ
SALNTNHGAWGILFDVSSALALDDHALLQNSANRWQEWVFKAIDENGVIPSAITRSDTSDYHGGPTKGIKGIAYTNFALL
ALTVSGELLFENGYDLWGSGAGKRLSVAYNKVATWILNPETFPYFQPNLIGVHNNAYFIILAKHYSSPSADELLKQGDLH
EDGFRLKLRSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37541; Mature: 37541

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFVLFLLFMGVCVCVQAHAEQDYFFRDFKSTDLPQKLHLDKKLSQTIQPCAQLNASKH
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
YTSAGVREPDACTKSFKKSAIMSYDLALGYLVSKNKQYGLKAIEILNAWAKELQSVDTYQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SEDNINFYMPYMNMAYWFVKKAFPSPEYEDFIKRMHQYSQSALNTNHGAWGILFDVSSAL
CCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH
ALDDHALLQNSANRWQEWVFKAIDENGVIPSAITRSDTSDYHGGPTKGIKGIAYTNFALL
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCEEEE
ALTVSGELLFENGYDLWGSGAGKRLSVAYNKVATWILNPETFPYFQPNLIGVHNNAYFII
EEEECCEEEEECCCCCCCCCCCCEEEEEHHHEEEEEECCCCCCCCCCCEEEEECCEEEEE
LAKHYSSPSADELLKQGDLHEDGFRLKLRSL
EEECCCCCCHHHHHHCCCCCCCCCEEEEECC
>Mature Secondary Structure
MKRFVLFLLFMGVCVCVQAHAEQDYFFRDFKSTDLPQKLHLDKKLSQTIQPCAQLNASKH
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
YTSAGVREPDACTKSFKKSAIMSYDLALGYLVSKNKQYGLKAIEILNAWAKELQSVDTYQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
SEDNINFYMPYMNMAYWFVKKAFPSPEYEDFIKRMHQYSQSALNTNHGAWGILFDVSSAL
CCCCCEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH
ALDDHALLQNSANRWQEWVFKAIDENGVIPSAITRSDTSDYHGGPTKGIKGIAYTNFALL
HCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEECCEEEE
ALTVSGELLFENGYDLWGSGAGKRLSVAYNKVATWILNPETFPYFQPNLIGVHNNAYFII
EEEECCEEEEECCCCCCCCCCCCEEEEEHHHEEEEEECCCCCCCCCCCEEEEECCEEEEE
LAKHYSSPSADELLKQGDLHEDGFRLKLRSL
EEECCCCCCHHHHHHCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA