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The map label for this gene is 188527081

Identifier: 188527081

GI number: 188527081

Start: 268086

End: 269378

Strand: Direct

Name: 188527081

Synonym: HPSH_01430

Alternate gene names: NA

Gene position: 268086-269378 (Clockwise)

Preceding gene: 188527080

Following gene: 188527082

Centisome position: 16.67

GC content: 36.81

Gene sequence:

>1293_bases
ATGGGTATTCAAATAAAGAAAAGATTTTTAGCAAGTTTATTGCTTTTTAGCCTGTTTTGCCTTAAGGCTGAAACCCTTTC
AGAGGATCATCAAATTCTATTGAGCTCAGACGCTTTCCACAGAGGGGATTTTGCTAGCGCTCAAAAAGGCTATATGAATC
TCTATAAGCAAACCAATAAGGTGGTGTATGCTAAAGAAGCGGCCATTTCAGCGGCGAGTTTAGGGGATATTAAAACCGCT
ATGCATTTAGCCATGCTCTATCAAAAAATCACCAATAATCGTAATGATGTTTCTATCAATAAGATTTTAGTGGATGGCTA
TGTGCAAATGGGGCAGATTGATAAGGCGATTGAATTGCTGCACAAAATCCGTAAAGAAGAAAAGACCATAGCCACAGACA
ATGTGTTAGGGACTTTGTATTTGACTCAAAAGCGTTTGGATAAGGCTTTCCCGCTGTTGAATAAGTTTTATAACCAAGTG
CATGATGAAGACAGCCTAGAAAAACTCATTACGATCTATTTTTTGCAAAATCGTAAAAAAGAGGGCTTGGATTTGTTGCA
ATCTCATATAGACAGGTATGGTTGCTCAGAGCAATTATGCCAAAAAGCGCTCAACACTTTCACGCAATTTAACGAGCTTG
ATTTGGCTAAAACGACTTTTGCTCGTTTGTATGAAAAAAACCCTATTGTTCAAAACGCCCAATTTTACATAGGGGTATTA
ATCTTGTTAAAAGAGTTTGATAAGGCCCAGCAAATCGCAGAATTATTCCCTTTTGACAGGCGTTTGTTGTTAGACTTATA
CACCGCACAAAAAAAATTCGCTCAAGCTTCCAAACAGGCTTCTTTGATCTATCAGGAAAAAAAAGACCCTAAATTCTTAG
GATTAGAGGCTATTTATCATTATGAAAGCTTGAGCACAAAAAATAAAAAACTCACCAAACAAGAGATGCTGCCTATCATT
CAAAAATTAGAAAAAGCCACCAAAGAGCGCCAGCAAATCCTCGCTAAAACTAAAGATAAAGAAGACGTGCAAGACGCTTT
CTTTTATAATTTCTTAGGGTATTCCTTAATAGATTATGACTTAGATATTAAAAGGGGCATGGATTTTGTGAGGAAAGCCT
TAGCGTTGGATTCTGGCTCAGTGCTTTATTTGGATTCTTTAGCATGGGGTTATTACAAATTAGGGAATTGTTTGGAGGCT
AAAAAAATCTTTTCTAGCATCGCTAAAGAGTTTATTCAAGCCGAACCCGAACTAAAAGAGCACAATAAAATCATTCAAGA
ATGCAAGAAATAG

Upstream 100 bases:

>100_bases
GGAAGCTTTTTGTCAAAGCTGTCCGGGCATTACACAAAAAACCAAAGAAACTAAAGTGCGCTAAAATTCACTTCAGTGAT
ACAAAAAAGGAAATAAAATA

Downstream 100 bases:

>100_bases
GGATTTTAGAAAATTTACAAAAAAGCTTAGCCTTAAAAGAGGGCATGCTTTCTTATGAAATGCTGGGTAAAAGCCTGTCG
TATAACCCTTACTTGCCTAG

Product: ATP-dependent nuclease

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; ATP Dependent Nuclease AddB; ATP-Dependent Nuclease; Tpr Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MGIQIKKRFLASLLLFSLFCLKAETLSEDHQILLSSDAFHRGDFASAQKGYMNLYKQTNKVVYAKEAAISAASLGDIKTA
MHLAMLYQKITNNRNDVSINKILVDGYVQMGQIDKAIELLHKIRKEEKTIATDNVLGTLYLTQKRLDKAFPLLNKFYNQV
HDEDSLEKLITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALNTFTQFNELDLAKTTFARLYEKNPIVQNAQFYIGVL
ILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFAQASKQASLIYQEKKDPKFLGLEAIYHYESLSTKNKKLTKQEMLPII
QKLEKATKERQQILAKTKDKEDVQDAFFYNFLGYSLIDYDLDIKRGMDFVRKALALDSGSVLYLDSLAWGYYKLGNCLEA
KKIFSSIAKEFIQAEPELKEHNKIIQECKK

Sequences:

>Translated_430_residues
MGIQIKKRFLASLLLFSLFCLKAETLSEDHQILLSSDAFHRGDFASAQKGYMNLYKQTNKVVYAKEAAISAASLGDIKTA
MHLAMLYQKITNNRNDVSINKILVDGYVQMGQIDKAIELLHKIRKEEKTIATDNVLGTLYLTQKRLDKAFPLLNKFYNQV
HDEDSLEKLITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALNTFTQFNELDLAKTTFARLYEKNPIVQNAQFYIGVL
ILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFAQASKQASLIYQEKKDPKFLGLEAIYHYESLSTKNKKLTKQEMLPII
QKLEKATKERQQILAKTKDKEDVQDAFFYNFLGYSLIDYDLDIKRGMDFVRKALALDSGSVLYLDSLAWGYYKLGNCLEA
KKIFSSIAKEFIQAEPELKEHNKIIQECKK
>Mature_429_residues
GIQIKKRFLASLLLFSLFCLKAETLSEDHQILLSSDAFHRGDFASAQKGYMNLYKQTNKVVYAKEAAISAASLGDIKTAM
HLAMLYQKITNNRNDVSINKILVDGYVQMGQIDKAIELLHKIRKEEKTIATDNVLGTLYLTQKRLDKAFPLLNKFYNQVH
DEDSLEKLITIYFLQNRKKEGLDLLQSHIDRYGCSEQLCQKALNTFTQFNELDLAKTTFARLYEKNPIVQNAQFYIGVLI
LLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFAQASKQASLIYQEKKDPKFLGLEAIYHYESLSTKNKKLTKQEMLPIIQ
KLEKATKERQQILAKTKDKEDVQDAFFYNFLGYSLIDYDLDIKRGMDFVRKALALDSGSVLYLDSLAWGYYKLGNCLEAK
KIFSSIAKEFIQAEPELKEHNKIIQECKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49684; Mature: 49553

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure 
GIQIKKRFLASLLLFSLFCLKAETLSEDHQILLSSDAFHRGDFASAQKGYMNLYKQTNK
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC
VVYAKEAAISAASLGDIKTAMHLAMLYQKITNNRNDVSINKILVDGYVQMGQIDKAIELL
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHH
HKIRKEEKTIATDNVLGTLYLTQKRLDKAFPLLNKFYNQVHDEDSLEKLITIYFLQNRKK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
EGLDLLQSHIDRYGCSEQLCQKALNTFTQFNELDLAKTTFARLYEKNPIVQNAQFYIGVL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
ILLKEFDKAQQIAELFPFDRRLLLDLYTAQKKFAQASKQASLIYQEKKDPKFLGLEAIYH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YESLSTKNKKLTKQEMLPIIQKLEKATKERQQILAKTKDKEDVQDAFFYNFLGYSLIDYD
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
LDIKRGMDFVRKALALDSGSVLYLDSLAWGYYKLGNCLEAKKIFSSIAKEFIQAEPELKE
CCHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
HNKIIQECKK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA