| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187935297
Identifier: 187935297
GI number: 187935297
Start: 3389003
End: 3390178
Strand: Reverse
Name: 187935297
Synonym: CLL_A3236
Alternate gene names: NA
Gene position: 3390178-3389003 (Counterclockwise)
Preceding gene: 187933833
Following gene: 187932339
Centisome position: 89.21
GC content: 25.09
Gene sequence:
>1176_bases ATGGAGCGTAAAATAGTAAAACTAAGGGTGGATATGTATAATGATACTAAGTTTAAGATAATAGATACAATGGAGGACAG GGATCTTATCCATTATATTTGGACTAGACTTTTAACTCTAGCAGGTAAGGTTAATTTAGAGGGCGCTTTATATCTTTCAA AGAGTATTCCTTATAGTATAGAAACTCTGGCTTTGGAATTTAACAGGAGTGCTAAAAATGTGGAGATAGCTTTAATGGTA TTTATGGATTTAGAAATGATTGAATTAGGTGAAAATAATGTTTATAAAGTTAGGAATTTTGCTAAGCATCAAAATATTAA ACCTAAGAAGAAAGAAGATTCTAATGATAAAAAGGAAGGGTGTAATGATAAATCTAAAAATGTTCACAATAATGTTGATA ATAGAGAAAGTGATGTTAATAAGTTTGATGAAAGTGATTGTATTGTTGAAAATCAACTTATTGGGAATGAAGGAGATAAT TATATTTTAGAAAGTTTATATAATTTATGGGGTTCAACTTATGAGAATACGGAAAATAGTATATCTAATTTGAATATTGA AAAACATGATGAAGATAAAACAACTTTACATAAAAGCAAAGATATAAATATTACAGGAGCTTTTGAAAGTAAAATTCATA CAGTTAATAAAGAAAATATACAGAATTTAAATAAAGAGTGCATTAAGGAAAATAAATCAAATAGTAAAGAATTTGTAGTT AATCATGATAAAGAAAATGAAATTTCTAATTTATACAACAATGTTAAAGTAGTAGATTTTAATAGTGATAAAAAAGACTC TGATGTTAATATAGAGAGTATTAATGTAAGAGATAATATTAATAAAAAAGATAACATTGAAATTCAAAATAAAGATATTT TAGATAAAATAAATTTAAATAAAGCAAGTGCAACTGAAAATTTCCTTAATAATAAAAGTGATGTAAAAAATAAAATAGAA TTAAAAGATAAAAGTGATTTAGACGCTGAATTTGTATTTAGTAAAGCTAATGATAATAAAAAGAGAAGCAAACCAAAAAT GAAGAATAAAAAGGTAAGCAAGAAAAATGATAATGAGATTATTTCTAGTTGGGATGATGAGGCTGATGATTTTGAGATTT GCGAATTTACTGATGAGCCACCAAAAGGAAAGTTAATTGCTACTTTTAAAGTTTAG
Upstream 100 bases:
>100_bases TTTCTTTCTAATGCATATATATTATTTAGAAGCTTAAGATACATAACTTATAAAAGAAAATGTGTATAAATTTAAAAATT AGAAGGAGATGCTAATAATT
Downstream 100 bases:
>100_bases AAATTTTTTTGAAAAGAATCCAAAGGAGGTAAAACGCCTCTTTAGAAATCAACCCTAGGGTGTGAAATTTTAACAAATAC GAGTTTAAGAACTATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: N- Phage Replisome Organiser; N-Terminal Phage Replisome Organizer; Phage-Like Protein; Phage Replication Protein; Phage Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MERKIVKLRVDMYNDTKFKIIDTMEDRDLIHYIWTRLLTLAGKVNLEGALYLSKSIPYSIETLALEFNRSAKNVEIALMV FMDLEMIELGENNVYKVRNFAKHQNIKPKKKEDSNDKKEGCNDKSKNVHNNVDNRESDVNKFDESDCIVENQLIGNEGDN YILESLYNLWGSTYENTENSISNLNIEKHDEDKTTLHKSKDINITGAFESKIHTVNKENIQNLNKECIKENKSNSKEFVV NHDKENEISNLYNNVKVVDFNSDKKDSDVNIESINVRDNINKKDNIEIQNKDILDKINLNKASATENFLNNKSDVKNKIE LKDKSDLDAEFVFSKANDNKKRSKPKMKNKKVSKKNDNEIISSWDDEADDFEICEFTDEPPKGKLIATFKV
Sequences:
>Translated_391_residues MERKIVKLRVDMYNDTKFKIIDTMEDRDLIHYIWTRLLTLAGKVNLEGALYLSKSIPYSIETLALEFNRSAKNVEIALMV FMDLEMIELGENNVYKVRNFAKHQNIKPKKKEDSNDKKEGCNDKSKNVHNNVDNRESDVNKFDESDCIVENQLIGNEGDN YILESLYNLWGSTYENTENSISNLNIEKHDEDKTTLHKSKDINITGAFESKIHTVNKENIQNLNKECIKENKSNSKEFVV NHDKENEISNLYNNVKVVDFNSDKKDSDVNIESINVRDNINKKDNIEIQNKDILDKINLNKASATENFLNNKSDVKNKIE LKDKSDLDAEFVFSKANDNKKRSKPKMKNKKVSKKNDNEIISSWDDEADDFEICEFTDEPPKGKLIATFKV >Mature_391_residues MERKIVKLRVDMYNDTKFKIIDTMEDRDLIHYIWTRLLTLAGKVNLEGALYLSKSIPYSIETLALEFNRSAKNVEIALMV FMDLEMIELGENNVYKVRNFAKHQNIKPKKKEDSNDKKEGCNDKSKNVHNNVDNRESDVNKFDESDCIVENQLIGNEGDN YILESLYNLWGSTYENTENSISNLNIEKHDEDKTTLHKSKDINITGAFESKIHTVNKENIQNLNKECIKENKSNSKEFVV NHDKENEISNLYNNVKVVDFNSDKKDSDVNIESINVRDNINKKDNIEIQNKDILDKINLNKASATENFLNNKSDVKNKIE LKDKSDLDAEFVFSKANDNKKRSKPKMKNKKVSKKNDNEIISSWDDEADDFEICEFTDEPPKGKLIATFKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45294; Mature: 45294
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERKIVKLRVDMYNDTKFKIIDTMEDRDLIHYIWTRLLTLAGKVNLEGALYLSKSIPYSI CCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE ETLALEFNRSAKNVEIALMVFMDLEMIELGENNVYKVRNFAKHQNIKPKKKEDSNDKKEG EEEEEEECCCCCCEEEEEEEEECCCCEECCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHC CNDKSKNVHNNVDNRESDVNKFDESDCIVENQLIGNEGDNYILESLYNLWGSTYENTENS CCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCH ISNLNIEKHDEDKTTLHKSKDINITGAFESKIHTVNKENIQNLNKECIKENKSNSKEFVV HHHCCCCCCCCCHHHHHCCCCCEEEECHHHHHEECCHHHHHHHHHHHHHCCCCCCCEEEE NHDKENEISNLYNNVKVVDFNSDKKDSDVNIESINVRDNINKKDNIEIQNKDILDKINLN ECCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHCCCC KASATENFLNNKSDVKNKIELKDKSDLDAEFVFSKANDNKKRSKPKMKNKKVSKKNDNEI CHHHHHHHHCCHHHHCCEEEECCCCCCCCEEEEECCCCCHHHCCCCHHCCCCCCCCCCHH ISSWDDEADDFEICEFTDEPPKGKLIATFKV HHCCCCCCCCCEEEECCCCCCCCCEEEEEEC >Mature Secondary Structure MERKIVKLRVDMYNDTKFKIIDTMEDRDLIHYIWTRLLTLAGKVNLEGALYLSKSIPYSI CCCEEEEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEE ETLALEFNRSAKNVEIALMVFMDLEMIELGENNVYKVRNFAKHQNIKPKKKEDSNDKKEG EEEEEEECCCCCCEEEEEEEEECCCCEECCCCCEEHHHHHHHHCCCCCCCCCCCCCHHHC CNDKSKNVHNNVDNRESDVNKFDESDCIVENQLIGNEGDNYILESLYNLWGSTYENTENS CCCCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCH ISNLNIEKHDEDKTTLHKSKDINITGAFESKIHTVNKENIQNLNKECIKENKSNSKEFVV HHHCCCCCCCCCHHHHHCCCCCEEEECHHHHHEECCHHHHHHHHHHHHHCCCCCCCEEEE NHDKENEISNLYNNVKVVDFNSDKKDSDVNIESINVRDNINKKDNIEIQNKDILDKINLN ECCCCHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCHHHHCCCC KASATENFLNNKSDVKNKIELKDKSDLDAEFVFSKANDNKKRSKPKMKNKKVSKKNDNEI CHHHHHHHHCCHHHHCCEEEECCCCCCCCEEEEECCCCCHHHCCCCHHCCCCCCCCCCHH ISSWDDEADDFEICEFTDEPPKGKLIATFKV HHCCCCCCCCCEEEECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA