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The map label for this gene is rfbN [H]

Identifier: 187933833

GI number: 187933833

Start: 3390398

End: 3391246

Strand: Reverse

Name: rfbN [H]

Synonym: CLL_A3237

Alternate gene names: 187933833

Gene position: 3391246-3390398 (Counterclockwise)

Preceding gene: 187933332

Following gene: 187935297

Centisome position: 89.24

GC content: 26.38

Gene sequence:

>849_bases
ATGAAAATATCAATTATCTGCCCATTATACAATGCAGAGAATTACATATATAATTTAAATAAAAATTTATTAAGTCAAGA
ACGAGAGTCTAATCAAGAATTAGAAATATTATATGTTTTAACTAGAAGCAAAGATAAAAGTGAAGAAATCTTAAAAGAAT
TAAATTGCAATTATTGCATGATAGAGCCAAAAGATTTTTCTCATAGCAAAACTAGAGAAATGATGGTGAGTTTTGCTAGT
GGTGATATAATAGTTTTTATATCACAAGATGTAAAAATGAAAAATAAATTATGGCTTAAGAATTTAGTTACTCCAATAAT
AAGTGGGGAATGTGAAGCGAGTTTTAGCAGACAAATCTGCGAGAATAACAGTATAGAAAAGTATACTAGGGAAAAAAATT
ATCCAGAAGAATCTAGAGTAGCTTCTAAGAAAGATATAGAGAAATATGGATTATTAACATTCTTTTATTCAGATGCATCA
TCAGCAGTAAATGCTAAAATTTATAGAGAGCTTAATGCCTATGATGGTAAGGATATGCCTACCAATGAAGATATGTATTT
TGCACATAAATTAATTCATGCTGGATATAGAATTAAGTATTGTGCAGATTCAGAAGTTTATCATTCTCATGATTTTACGT
TTAAACAACTTTATAATAGGTATTATGATACTGGTGTGTTTTTTAAAGAAAATTCTTATTTAATAAAATATAAAGGAAAT
GAAAGTGGATTTACATTAGCTAAATATGTTTTCAAAAGAGCTTTGAAAGAAAGAAATATAAAAGTAATATTTAGTTTATT
ACCTAACTTTGGAGTAAGATATATTGCGATGAAAATTGGCCAAAAGTAA

Upstream 100 bases:

>100_bases
TAAGAAAATTAAACATAGGTTATAATTAAAGTAATAAATCAATGAGTGATAATTTTTTAACAATATTATTTATATTACAC
GGTAAAGGATGACTACATTT

Downstream 100 bases:

>100_bases
TTATTAGTTTTATTAAGTATAGGATTTAGAGAACATTTAGCTAGTGACAAGCACTATAACAGATAAGATATAAAAGTCTT
ATCTGTTTTTTATAAAAAAT

Product: glycosyl transferase, group 2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKISIICPLYNAENYIYNLNKNLLSQERESNQELEILYVLTRSKDKSEEILKELNCNYCMIEPKDFSHSKTREMMVSFAS
GDIIVFISQDVKMKNKLWLKNLVTPIISGECEASFSRQICENNSIEKYTREKNYPEESRVASKKDIEKYGLLTFFYSDAS
SAVNAKIYRELNAYDGKDMPTNEDMYFAHKLIHAGYRIKYCADSEVYHSHDFTFKQLYNRYYDTGVFFKENSYLIKYKGN
ESGFTLAKYVFKRALKERNIKVIFSLLPNFGVRYIAMKIGQK

Sequences:

>Translated_282_residues
MKISIICPLYNAENYIYNLNKNLLSQERESNQELEILYVLTRSKDKSEEILKELNCNYCMIEPKDFSHSKTREMMVSFAS
GDIIVFISQDVKMKNKLWLKNLVTPIISGECEASFSRQICENNSIEKYTREKNYPEESRVASKKDIEKYGLLTFFYSDAS
SAVNAKIYRELNAYDGKDMPTNEDMYFAHKLIHAGYRIKYCADSEVYHSHDFTFKQLYNRYYDTGVFFKENSYLIKYKGN
ESGFTLAKYVFKRALKERNIKVIFSLLPNFGVRYIAMKIGQK
>Mature_282_residues
MKISIICPLYNAENYIYNLNKNLLSQERESNQELEILYVLTRSKDKSEEILKELNCNYCMIEPKDFSHSKTREMMVSFAS
GDIIVFISQDVKMKNKLWLKNLVTPIISGECEASFSRQICENNSIEKYTREKNYPEESRVASKKDIEKYGLLTFFYSDAS
SAVNAKIYRELNAYDGKDMPTNEDMYFAHKLIHAGYRIKYCADSEVYHSHDFTFKQLYNRYYDTGVFFKENSYLIKYKGN
ESGFTLAKYVFKRALKERNIKVIFSLLPNFGVRYIAMKIGQK

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 33150; Mature: 33150

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISIICPLYNAENYIYNLNKNLLSQERESNQELEILYVLTRSKDKSEEILKELNCNYCM
CEEEEEEEEECCCCEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEE
IEPKDFSHSKTREMMVSFASGDIIVFISQDVKMKNKLWLKNLVTPIISGECEASFSRQIC
ECCCCCCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ENNSIEKYTREKNYPEESRVASKKDIEKYGLLTFFYSDASSAVNAKIYRELNAYDGKDMP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC
TNEDMYFAHKLIHAGYRIKYCADSEVYHSHDFTFKQLYNRYYDTGVFFKENSYLIKYKGN
CCCCHHHHHHHHHCCCEEEEECCCCEEECCCCHHHHHHHHHHCCCEEEECCCEEEEEECC
ESGFTLAKYVFKRALKERNIKVIFSLLPNFGVRYIAMKIGQK
CCCHHHHHHHHHHHHHHCCCEEHEEHHCCCCCEEEHEECCCC
>Mature Secondary Structure
MKISIICPLYNAENYIYNLNKNLLSQERESNQELEILYVLTRSKDKSEEILKELNCNYCM
CEEEEEEEEECCCCEEEECCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCEEE
IEPKDFSHSKTREMMVSFASGDIIVFISQDVKMKNKLWLKNLVTPIISGECEASFSRQIC
ECCCCCCCHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ENNSIEKYTREKNYPEESRVASKKDIEKYGLLTFFYSDASSAVNAKIYRELNAYDGKDMP
CCCCHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEECCCCCHHHHHHHHHHHCCCCCCCC
TNEDMYFAHKLIHAGYRIKYCADSEVYHSHDFTFKQLYNRYYDTGVFFKENSYLIKYKGN
CCCCHHHHHHHHHCCCEEEEECCCCEEECCCCHHHHHHHHHHCCCEEEECCCEEEEEECC
ESGFTLAKYVFKRALKERNIKVIFSLLPNFGVRYIAMKIGQK
CCCHHHHHHHHHHHHHHCCCEEHEEHHCCCCCEEEHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]