| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ilvE [H]
Identifier: 187935225
GI number: 187935225
Start: 1112778
End: 1113806
Strand: Reverse
Name: ilvE [H]
Synonym: CLL_A1088
Alternate gene names: 187935225
Gene position: 1113806-1112778 (Counterclockwise)
Preceding gene: 187934473
Following gene: 187934441
Centisome position: 29.31
GC content: 33.43
Gene sequence:
>1029_bases ATGGGGAAAAAAGTTGATATGGATTGGGGTAAACTAGGATTTAGTTACATAAAAACGGATTATCGTTATATTTCAACTTG GAAAGATGGTAAATGGGATGATGGCAAGCTTATAGAAGATAATATGCTTAAAATGAGTGAAGCTTCTACTGTTCTTCATT ATGGTCAAAGCTCTTTTGAAGGATTAAAAGCTTATACAACGAAAGAAGGGAAAATACAATTATTCAGACCTAATAGAAAT GCTGCTCGTATGAATGAAAGTTGTGATAAACTTCTTATGCCAAATATTCCTGAAGAAAAGTTTATAGACGCATGTATGCA AGTTGTTAAAGCTAATGAACATTTTGTTCCACCATATGGCACTGGTGCAACTTTATATATTAGACCTGTTATAATGGGGG TTGGAGATAATATAGGTGTAAAACCAGCATCTGAATATATTTTTACAGTATTTTGTATGCCAGTAGGACCTTACTTCTCT GGTGGATTAAAACCTTGTAACTTTATCGTTCAAGATGAATTTGATAGAGCCGCTCCACATGGTACTGGAAAACAAAAAGT TGGTGGTAATTATGCGGCCTCTCTTGAAGCTCATAAAAAAGCTACTGATGCTGGATATGCAGATTGTATTTATTTAGATC CTACTACCCACACAAAAATCGATGAAGTTGGTGCTGCAAACTTTATAGGAATAACTAAAAAGGGTGAATTTATAACACCT AAGTCTTCATCAATATTACCTAGTATAACAAAATATTCTTTACTTTATATAGCTGAACATTATTTAAATATGCCAGTATA TGAAAGAGAAGTTTTTGTTAATCAATTAGATGAATTTGCAGAAGCTGGTGCTTGTGGTACTGCTGCTGTAATAACTCCAA TTGGAGCTATAGATTACAATGGAAAGAGATTTGTGTTCCATAGTGAAACTGAAGTTGGACCTACAATAAAGAAATTATAT GAAATACTTTCTGGAATCCAAACAGGTGATGTAGAAGCTCCTGAAGGATGGATATACGAAGTTAAATAA
Upstream 100 bases:
>100_bases TATACTTTTTATGCTTAACTATAGAATTTTTGTTTTGATAGTGTTAGAATAAAAGGTATTAAGTAAAGGCAATAAGCCTA TAGATATGGAGGAATGTAAA
Downstream 100 bases:
>100_bases ATCTTTAATTTATACTATATTTTAAACAAGTTTTGATATTATAGCATAAAACTTTTAAAGTAAAGAAGCTTACTTTAAAA ATAATAAAATTAATAAAAAG
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT [H]
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MGKKVDMDWGKLGFSYIKTDYRYISTWKDGKWDDGKLIEDNMLKMSEASTVLHYGQSSFEGLKAYTTKEGKIQLFRPNRN AARMNESCDKLLMPNIPEEKFIDACMQVVKANEHFVPPYGTGATLYIRPVIMGVGDNIGVKPASEYIFTVFCMPVGPYFS GGLKPCNFIVQDEFDRAAPHGTGKQKVGGNYAASLEAHKKATDAGYADCIYLDPTTHTKIDEVGAANFIGITKKGEFITP KSSSILPSITKYSLLYIAEHYLNMPVYEREVFVNQLDEFAEAGACGTAAVITPIGAIDYNGKRFVFHSETEVGPTIKKLY EILSGIQTGDVEAPEGWIYEVK
Sequences:
>Translated_342_residues MGKKVDMDWGKLGFSYIKTDYRYISTWKDGKWDDGKLIEDNMLKMSEASTVLHYGQSSFEGLKAYTTKEGKIQLFRPNRN AARMNESCDKLLMPNIPEEKFIDACMQVVKANEHFVPPYGTGATLYIRPVIMGVGDNIGVKPASEYIFTVFCMPVGPYFS GGLKPCNFIVQDEFDRAAPHGTGKQKVGGNYAASLEAHKKATDAGYADCIYLDPTTHTKIDEVGAANFIGITKKGEFITP KSSSILPSITKYSLLYIAEHYLNMPVYEREVFVNQLDEFAEAGACGTAAVITPIGAIDYNGKRFVFHSETEVGPTIKKLY EILSGIQTGDVEAPEGWIYEVK >Mature_341_residues GKKVDMDWGKLGFSYIKTDYRYISTWKDGKWDDGKLIEDNMLKMSEASTVLHYGQSSFEGLKAYTTKEGKIQLFRPNRNA ARMNESCDKLLMPNIPEEKFIDACMQVVKANEHFVPPYGTGATLYIRPVIMGVGDNIGVKPASEYIFTVFCMPVGPYFSG GLKPCNFIVQDEFDRAAPHGTGKQKVGGNYAASLEAHKKATDAGYADCIYLDPTTHTKIDEVGAANFIGITKKGEFITPK SSSILPSITKYSLLYIAEHYLNMPVYEREVFVNQLDEFAEAGACGTAAVITPIGAIDYNGKRFVFHSETEVGPTIKKLYE ILSGIQTGDVEAPEGWIYEVK
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI296010904, Length=341, Percent_Identity=33.1378299120235, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI38176287, Length=341, Percent_Identity=33.1378299120235, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI296010906, Length=341, Percent_Identity=33.1378299120235, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI50658084, Length=349, Percent_Identity=30.6590257879656, Blast_Score=152, Evalue=6e-37, Organism=Homo sapiens, GI258614015, Length=302, Percent_Identity=31.1258278145695, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI296010902, Length=250, Percent_Identity=33.6, Blast_Score=116, Evalue=2e-26, Organism=Homo sapiens, GI296010900, Length=250, Percent_Identity=33.6, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI48994963, Length=317, Percent_Identity=29.3375394321767, Blast_Score=110, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17568601, Length=355, Percent_Identity=29.5774647887324, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI17565728, Length=357, Percent_Identity=29.6918767507003, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6322608, Length=341, Percent_Identity=31.0850439882698, Blast_Score=159, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6322002, Length=340, Percent_Identity=31.7647058823529, Blast_Score=157, Evalue=2e-39, Organism=Drosophila melanogaster, GI24641779, Length=338, Percent_Identity=29.8816568047337, Blast_Score=155, Evalue=3e-38,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005786 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 37941; Mature: 37809
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKKVDMDWGKLGFSYIKTDYRYISTWKDGKWDDGKLIEDNMLKMSEASTVLHYGQSSFE CCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHC GLKAYTTKEGKIQLFRPNRNAARMNESCDKLLMPNIPEEKFIDACMQVVKANEHFVPPYG CCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC TGATLYIRPVIMGVGDNIGVKPASEYIFTVFCMPVGPYFSGGLKPCNFIVQDEFDRAAPH CCCEEEEEEEEEECCCCCCCCCCHHEEEEEEEEECCHHHCCCCCCCEEEEECCCHHCCCC GTGKQKVGGNYAASLEAHKKATDAGYADCIYLDPTTHTKIDEVGAANFIGITKKGEFITP CCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEEECCCCCEECC KSSSILPSITKYSLLYIAEHYLNMPVYEREVFVNQLDEFAEAGACGTAAVITPIGAIDYN CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEECC GKRFVFHSETEVGPTIKKLYEILSGIQTGDVEAPEGWIYEVK CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEC >Mature Secondary Structure GKKVDMDWGKLGFSYIKTDYRYISTWKDGKWDDGKLIEDNMLKMSEASTVLHYGQSSFE CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHC GLKAYTTKEGKIQLFRPNRNAARMNESCDKLLMPNIPEEKFIDACMQVVKANEHFVPPYG CCEEEECCCCCEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC TGATLYIRPVIMGVGDNIGVKPASEYIFTVFCMPVGPYFSGGLKPCNFIVQDEFDRAAPH CCCEEEEEEEEEECCCCCCCCCCHHEEEEEEEEECCHHHCCCCCCCEEEEECCCHHCCCC GTGKQKVGGNYAASLEAHKKATDAGYADCIYLDPTTHTKIDEVGAANFIGITKKGEFITP CCCCCCCCCCEEEHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCEEEECCCCCEECC KSSSILPSITKYSLLYIAEHYLNMPVYEREVFVNQLDEFAEAGACGTAAVITPIGAIDYN CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCEEECC GKRFVFHSETEVGPTIKKLYEILSGIQTGDVEAPEGWIYEVK CCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]