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The map label for this gene is dcd [H]

Identifier: 187934830

GI number: 187934830

Start: 2764436

End: 2764957

Strand: Reverse

Name: dcd [H]

Synonym: CLL_A2648

Alternate gene names: 187934830

Gene position: 2764957-2764436 (Counterclockwise)

Preceding gene: 187933271

Following gene: 187935310

Centisome position: 72.76

GC content: 26.82

Gene sequence:

>522_bases
ATGATATTATCAGGAAAAGAAATATTAAAACACATAGGTGAAGATATAGTTATAGAACCATTTAGCGAAGAGAGAATAAA
TCCCAATAGTTATAATTTAACCTTATTTAATGAATTGTTAGTATATAAAAATGAGACACTAGATATGAAAATTCCAAATG
AAACTGAGAAACTTATAATACCTGAAGAAGGATTATTATTAGAACCAGGAAAGTTATATTTAGGTAGGACAAATGAATTT
ACTCAAACTAATAAATATGTTCCAATGCTAGAAGGTAGATCATCAACAGGAAGACTAGGATTATTTATACATGTAACAGC
AGGATTTGGAGATATTGGTTTTGCAGGTTATTGGACATTAGAAATATTCTGTGTTCAGCCTATAAAAATATATCCTAATA
CAGAAATATGTCAAATTTATTATCATAATATTGATGGTGAATATGATTTGTATAATAGTGGGAAATATCAAAACAATAAT
GGTATACAACCAAGTCTTATGTACAAGGATTTTGAAAAATAA

Upstream 100 bases:

>100_bases
AACTTAGAAATTAGTACATAAAGATAATCGTTTTAATCAAAAAATTATTGATGAGCAAATTGATTTTAAAAAATTAGTTA
TGAAAGAGAGGATACTATAA

Downstream 100 bases:

>100_bases
AATTCATTTTAAAAATTTACATTCTTAACTAAATTTGATGGGGATTAAATTTCTCTATAGACACAAAATATTTAGGAAAG
GATGTGTTTCATATGGCAAA

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MILSGKEILKHIGEDIVIEPFSEERINPNSYNLTLFNELLVYKNETLDMKIPNETEKLIIPEEGLLLEPGKLYLGRTNEF
TQTNKYVPMLEGRSSTGRLGLFIHVTAGFGDIGFAGYWTLEIFCVQPIKIYPNTEICQIYYHNIDGEYDLYNSGKYQNNN
GIQPSLMYKDFEK

Sequences:

>Translated_173_residues
MILSGKEILKHIGEDIVIEPFSEERINPNSYNLTLFNELLVYKNETLDMKIPNETEKLIIPEEGLLLEPGKLYLGRTNEF
TQTNKYVPMLEGRSSTGRLGLFIHVTAGFGDIGFAGYWTLEIFCVQPIKIYPNTEICQIYYHNIDGEYDLYNSGKYQNNN
GIQPSLMYKDFEK
>Mature_173_residues
MILSGKEILKHIGEDIVIEPFSEERINPNSYNLTLFNELLVYKNETLDMKIPNETEKLIIPEEGLLLEPGKLYLGRTNEF
TQTNKYVPMLEGRSSTGRLGLFIHVTAGFGDIGFAGYWTLEIFCVQPIKIYPNTEICQIYYHNIDGEYDLYNSGKYQNNN
GIQPSLMYKDFEK

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962 [H]

Pfam domain/function: NA

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 19945; Mature: 19945

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSGKEILKHIGEDIVIEPFSEERINPNSYNLTLFNELLVYKNETLDMKIPNETEKLII
CCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCCEEEE
PEEGLLLEPGKLYLGRTNEFTQTNKYVPMLEGRSSTGRLGLFIHVTAGFGDIGFAGYWTL
CCCCCEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEE
EIFCVQPIKIYPNTEICQIYYHNIDGEYDLYNSGKYQNNNGIQPSLMYKDFEK
EEEEECCEEECCCCCEEEEEEECCCCCEEECCCCCEECCCCCCCEEECCCCCC
>Mature Secondary Structure
MILSGKEILKHIGEDIVIEPFSEERINPNSYNLTLFNELLVYKNETLDMKIPNETEKLII
CCCCHHHHHHHCCCCEEEECCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCCEEEE
PEEGLLLEPGKLYLGRTNEFTQTNKYVPMLEGRSSTGRLGLFIHVTAGFGDIGFAGYWTL
CCCCCEECCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEEEEE
EIFCVQPIKIYPNTEICQIYYHNIDGEYDLYNSGKYQNNNGIQPSLMYKDFEK
EEEEECCEEECCCCCEEEEEEECCCCCEEECCCCCEECCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA