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The map label for this gene is licB [H]

Identifier: 187934786

GI number: 187934786

Start: 3321917

End: 3322888

Strand: Reverse

Name: licB [H]

Synonym: CLL_A3195

Alternate gene names: 187934786

Gene position: 3322888-3321917 (Counterclockwise)

Preceding gene: 187934100

Following gene: 187935484

Centisome position: 87.44

GC content: 31.48

Gene sequence:

>972_bases
ATGAATTTTAATAATAATTATAAAAAAGGAGTAGGATGTGGAATTATTTCAGCTATATCATGGGGGGCTGATACAGTTCT
TATGGGATTTATATTAGCAATGACACCGTTTGTAGAAACAAAACAAGCTATAATACTTGCTCCGATAATAACAGCCTTTT
TACATGATAGTTTTTCTGCAATATGGACATTTATATATCTTGGATTAAGAAAAAAATTAGGTGACTTTTTTAGAGCAATT
AGAACAAAGAGTGCTTTATGGGTTGCTCTTGCTGCATTACTTGGAGGACCTATTGGCATGAGTGGATATTTATTATCTGT
AAAATATATAGGACCATCTTATACAGCTATTATTTCGTCATTATATCCTGCAATTGGAGCAGTACTTGCCACTATAATTC
TAAAAGAAAAAATTAATAAGAGTGCATGGATTGGGTTATTAGCAGCTATCTTAGGTGTATCTATACTTGGATATACATCT
ACAACAAGTACTGCTAATCCTGTAGGTTTTATTTTTGCAATAATTTGTGCATTTGGTTGGGGTAGTGAATGTGTAGTGTG
TGCATATGGAATGAGAGGTAATGAAGTAACTTCAGAATTTGCTTTGCAAATAAGGCAATTTACTTCAGCTGTTGTATATG
GATTAATTATTGTTCCTATAGTTGGTGGAATAGGACTTAGTTTTAATATCTTTAAGTATAGCGCAATATTTTGGATTGCA
GGAACAGCATTGGCTGCTACTGTATCATATTTATTTTACTATACAGCAATATATAAAATTGGAGCAACTAGGGCTATGGG
AGTAAATATAACATATGTTGTTTGGGCAATTGTATTTGATGCCATATTCTTAGGAAACAAAATAAATGCTTTAACTATTT
TAAGTAGTGTTTTAGTTATAATAGGAGTTTATTTTATTGCAAAAGAGCCTGAACAAGAAATGGAAGCAATAAAGCTTGTA
GAAACACAATAA

Upstream 100 bases:

>100_bases
GCTTTGAACAATGAACAATGATAATATTAATTTGTTCATAAAATGAACTAAAAATAATATTTAATATATTGAGTAACAGC
AATAAAAGGGGGACTTTAAA

Downstream 100 bases:

>100_bases
AAATTTACTTTAATAAAATATAGCGTTTTAAAAAGTAAATTTATAAAATTGATCAATTATATTTAAATGTTAATATTCAT
AAAATGTTTTTTAAGTCTAT

Product: integral membrane protein domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNFNNNYKKGVGCGIISAISWGADTVLMGFILAMTPFVETKQAIILAPIITAFLHDSFSAIWTFIYLGLRKKLGDFFRAI
RTKSALWVALAALLGGPIGMSGYLLSVKYIGPSYTAIISSLYPAIGAVLATIILKEKINKSAWIGLLAAILGVSILGYTS
TTSTANPVGFIFAIICAFGWGSECVVCAYGMRGNEVTSEFALQIRQFTSAVVYGLIIVPIVGGIGLSFNIFKYSAIFWIA
GTALAATVSYLFYYTAIYKIGATRAMGVNITYVVWAIVFDAIFLGNKINALTILSSVLVIIGVYFIAKEPEQEMEAIKLV
ETQ

Sequences:

>Translated_323_residues
MNFNNNYKKGVGCGIISAISWGADTVLMGFILAMTPFVETKQAIILAPIITAFLHDSFSAIWTFIYLGLRKKLGDFFRAI
RTKSALWVALAALLGGPIGMSGYLLSVKYIGPSYTAIISSLYPAIGAVLATIILKEKINKSAWIGLLAAILGVSILGYTS
TTSTANPVGFIFAIICAFGWGSECVVCAYGMRGNEVTSEFALQIRQFTSAVVYGLIIVPIVGGIGLSFNIFKYSAIFWIA
GTALAATVSYLFYYTAIYKIGATRAMGVNITYVVWAIVFDAIFLGNKINALTILSSVLVIIGVYFIAKEPEQEMEAIKLV
ETQ
>Mature_323_residues
MNFNNNYKKGVGCGIISAISWGADTVLMGFILAMTPFVETKQAIILAPIITAFLHDSFSAIWTFIYLGLRKKLGDFFRAI
RTKSALWVALAALLGGPIGMSGYLLSVKYIGPSYTAIISSLYPAIGAVLATIILKEKINKSAWIGLLAAILGVSILGYTS
TTSTANPVGFIFAIICAFGWGSECVVCAYGMRGNEVTSEFALQIRQFTSAVVYGLIIVPIVGGIGLSFNIFKYSAIFWIA
GTALAATVSYLFYYTAIYKIGATRAMGVNITYVVWAIVFDAIFLGNKINALTILSSVLVIIGVYFIAKEPEQEMEAIKLV
ETQ

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34833; Mature: 34833

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFNNNYKKGVGCGIISAISWGADTVLMGFILAMTPFVETKQAIILAPIITAFLHDSFSA
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IWTFIYLGLRKKLGDFFRAIRTKSALWVALAALLGGPIGMSGYLLSVKYIGPSYTAIISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHH
LYPAIGAVLATIILKEKINKSAWIGLLAAILGVSILGYTSTTSTANPVGFIFAIICAFGW
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GSECVVCAYGMRGNEVTSEFALQIRQFTSAVVYGLIIVPIVGGIGLSFNIFKYSAIFWIA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
GTALAATVSYLFYYTAIYKIGATRAMGVNITYVVWAIVFDAIFLGNKINALTILSSVLVI
HHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IGVYFIAKEPEQEMEAIKLVETQ
HHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNFNNNYKKGVGCGIISAISWGADTVLMGFILAMTPFVETKQAIILAPIITAFLHDSFSA
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
IWTFIYLGLRKKLGDFFRAIRTKSALWVALAALLGGPIGMSGYLLSVKYIGPSYTAIISS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHH
LYPAIGAVLATIILKEKINKSAWIGLLAAILGVSILGYTSTTSTANPVGFIFAIICAFGW
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
GSECVVCAYGMRGNEVTSEFALQIRQFTSAVVYGLIIVPIVGGIGLSFNIFKYSAIFWIA
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHH
GTALAATVSYLFYYTAIYKIGATRAMGVNITYVVWAIVFDAIFLGNKINALTILSSVLVI
HHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
IGVYFIAKEPEQEMEAIKLVETQ
HHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]