Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187934685
Identifier: 187934685
GI number: 187934685
Start: 2256140
End: 2258071
Strand: Reverse
Name: 187934685
Synonym: CLL_A2171
Alternate gene names: NA
Gene position: 2258071-2256140 (Counterclockwise)
Preceding gene: 187935490
Following gene: 187933921
Centisome position: 59.42
GC content: 31.11
Gene sequence:
>1932_bases ATGGCATTAGGAAAGATGTTTGAAAAAACTATAAAACTAGTAGGAACAGTATCTAAGGTTGGTGTTCAATTAGGAGCTGA TATAGTAGGAACAGTAGCAGAAAAAATTGATGATGATCATGAGATAAAACTAAGGATTTCAGAGTATGGAGTAAAAAAAG GACAATCTATAAAAGCTATCACTACTGAAGTAGCTGGTAAGTCATCAGAGATAGTTGATAGAGCAGTTGACAATAGTATT AATGTACTAAAAATTGGAAGCGTAATAATAAAAGAAGGTATAAGTCAAGTTGCAGAAGGTATAGATTCAAGTATTAAAGG AATGAATAGTTATAATAATCACACCATGGAGAATAATGGTAATAAAAGCCACTGTGATTCTACACAGAATCAACCTGATA AAACTGAAAGTATATCTATGGAGCATAAAAGAAATGTATTAAAAGAAGAAAAATATAGTGACGTTAAATCAAAGGATATA GGTTACGAAGCAGTTATGAATAGTGTAATTTTAATAGCTCAAAAAAATGTTAGTTTTTTAAAGTTTGTTAGCCAAATTGA AGAACATAATTTGAAGTTTTTATTAGAAAATTACTATCAAAGACTTAAGATTTCAAATAAACTTGATTATGTAAATTTAG GTGAGAATGGGTGTATTGAGTTTGCAGGTGCACTGTTACTTTTAATATATAGTTATGCTAAAAATGATACTACAGCAATA AATGCTTGTAATCAAGCACTTATTATGGCTTTTAAAGGTGCCTCACCAAGGATATTTAGTGATGTTATGGATTATATAAT AAATGAAGAAACAACTATTCCATATGCTGATTGGAGTGCTGTATACAGATATCTAAAGGACAACTATGGAACTTGGATTA TAAAAATAGAATTTGCATCAGATTATACAATGAGGGATCATTTTAGATATAGTAAATTTATGGATGGAGAAACTGAAAAT GAAGCTAGTGTTACAAGTAAGAAGGGTAGAAATGGATTAAGCCATGGGGCTAATATTCAAATAACAAAAGTGAATATTGA ATCAAATATAAATAGTAATCAAGTAGAAAACAATCTATATAAACATTCAGTTGCTTTTGAAGAGGTTGAAATTAAGGATA AAAACGAGAAGGTCATACAAAATAATAATGAATATATTACGGAAAATATAAAAATGAATAATGAGATAATAAATAAGTCT ACGTTAATAAGCCAAGAACAGGCATTTAACGTGTTAGAGAAAAGATTAGAAAAAGCTACTGAAACAATAGTAAAAGGAGG ACAATCTTACATTACTAAGATAATGAATGCACCTGATAATGAAGTGTATACAGAGATCCTTAATGCATTAGGAGGTATAA GGTCTTCTTTGACGTTAAAGGCATTTAATTCTACTAAAGGATTCTTTGTTAAGAAGACTCCTGATGCTACTATAGTAGCT AAGGGTGTTGCTACTGTTGAGGTAGAAGAAGAACTAAAGGCTATAGTAGATGAAGTAGTGGATGAAGCTGTAGATAAGAA TAAGGTATGGGCTAAGATTAGAGCTTTAGCTGTACTTGTATTCAAGAAGACTATTGCTGTACCAAAGGGCGTTTTAGCAT TCACCTTTGATGATACTACTGTACTGGGAACTGCAGTAGGCAAAATAGCCTATGATACTGCAAGAGAGTTTATATTTGGA AGTAAAGTCAAAAGTAATGAAGCATTAAATGATGCTACTTTTAATAAGACAAAAGAACAATTGGATAAGGAGTTACAAGC GAAGAGAGAGTCATATTTTCAAGATGAGGAAATGGTGAGACTTAGAAATAACTTATTTGAAGCTAGAAAAAAAGCTGAGG CAGAAGAGCGAGAAAAGTTTAAAAAGTCCCTTGGTTTAGAGGATGAGTTTTTGAACGCACTGAAAAGCCTAAGAGAAGAG CAAAAGGAATAG
Upstream 100 bases:
>100_bases TATAGTCTGGCACTGAGAGAATTTGTATGTAGTTTTTATGGAGTTGTGGCTAGATAATTAATATTTAGAAAATATATAAT TAAAAAAGCGGAGGAGCATT
Downstream 100 bases:
>100_bases AGAATTTTAAGTCTGCTATGACAAGTAAGAAGATGGCAATTAAAATCAAGTAAGTTGCAAGTAAACAAAGTATATTCTCA AAATGAAATATTATTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MALGKMFEKTIKLVGTVSKVGVQLGADIVGTVAEKIDDDHEIKLRISEYGVKKGQSIKAITTEVAGKSSEIVDRAVDNSI NVLKIGSVIIKEGISQVAEGIDSSIKGMNSYNNHTMENNGNKSHCDSTQNQPDKTESISMEHKRNVLKEEKYSDVKSKDI GYEAVMNSVILIAQKNVSFLKFVSQIEEHNLKFLLENYYQRLKISNKLDYVNLGENGCIEFAGALLLLIYSYAKNDTTAI NACNQALIMAFKGASPRIFSDVMDYIINEETTIPYADWSAVYRYLKDNYGTWIIKIEFASDYTMRDHFRYSKFMDGETEN EASVTSKKGRNGLSHGANIQITKVNIESNINSNQVENNLYKHSVAFEEVEIKDKNEKVIQNNNEYITENIKMNNEIINKS TLISQEQAFNVLEKRLEKATETIVKGGQSYITKIMNAPDNEVYTEILNALGGIRSSLTLKAFNSTKGFFVKKTPDATIVA KGVATVEVEEELKAIVDEVVDEAVDKNKVWAKIRALAVLVFKKTIAVPKGVLAFTFDDTTVLGTAVGKIAYDTAREFIFG SKVKSNEALNDATFNKTKEQLDKELQAKRESYFQDEEMVRLRNNLFEARKKAEAEEREKFKKSLGLEDEFLNALKSLREE QKE
Sequences:
>Translated_643_residues MALGKMFEKTIKLVGTVSKVGVQLGADIVGTVAEKIDDDHEIKLRISEYGVKKGQSIKAITTEVAGKSSEIVDRAVDNSI NVLKIGSVIIKEGISQVAEGIDSSIKGMNSYNNHTMENNGNKSHCDSTQNQPDKTESISMEHKRNVLKEEKYSDVKSKDI GYEAVMNSVILIAQKNVSFLKFVSQIEEHNLKFLLENYYQRLKISNKLDYVNLGENGCIEFAGALLLLIYSYAKNDTTAI NACNQALIMAFKGASPRIFSDVMDYIINEETTIPYADWSAVYRYLKDNYGTWIIKIEFASDYTMRDHFRYSKFMDGETEN EASVTSKKGRNGLSHGANIQITKVNIESNINSNQVENNLYKHSVAFEEVEIKDKNEKVIQNNNEYITENIKMNNEIINKS TLISQEQAFNVLEKRLEKATETIVKGGQSYITKIMNAPDNEVYTEILNALGGIRSSLTLKAFNSTKGFFVKKTPDATIVA KGVATVEVEEELKAIVDEVVDEAVDKNKVWAKIRALAVLVFKKTIAVPKGVLAFTFDDTTVLGTAVGKIAYDTAREFIFG SKVKSNEALNDATFNKTKEQLDKELQAKRESYFQDEEMVRLRNNLFEARKKAEAEEREKFKKSLGLEDEFLNALKSLREE QKE >Mature_642_residues ALGKMFEKTIKLVGTVSKVGVQLGADIVGTVAEKIDDDHEIKLRISEYGVKKGQSIKAITTEVAGKSSEIVDRAVDNSIN VLKIGSVIIKEGISQVAEGIDSSIKGMNSYNNHTMENNGNKSHCDSTQNQPDKTESISMEHKRNVLKEEKYSDVKSKDIG YEAVMNSVILIAQKNVSFLKFVSQIEEHNLKFLLENYYQRLKISNKLDYVNLGENGCIEFAGALLLLIYSYAKNDTTAIN ACNQALIMAFKGASPRIFSDVMDYIINEETTIPYADWSAVYRYLKDNYGTWIIKIEFASDYTMRDHFRYSKFMDGETENE ASVTSKKGRNGLSHGANIQITKVNIESNINSNQVENNLYKHSVAFEEVEIKDKNEKVIQNNNEYITENIKMNNEIINKST LISQEQAFNVLEKRLEKATETIVKGGQSYITKIMNAPDNEVYTEILNALGGIRSSLTLKAFNSTKGFFVKKTPDATIVAK GVATVEVEEELKAIVDEVVDEAVDKNKVWAKIRALAVLVFKKTIAVPKGVLAFTFDDTTVLGTAVGKIAYDTAREFIFGS KVKSNEALNDATFNKTKEQLDKELQAKRESYFQDEEMVRLRNNLFEARKKAEAEEREKFKKSLGLEDEFLNALKSLREEQ KE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72309; Mature: 72178
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGKMFEKTIKLVGTVSKVGVQLGADIVGTVAEKIDDDHEIKLRISEYGVKKGQSIKAI CCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCHHH TTEVAGKSSEIVDRAVDNSINVLKIGSVIIKEGISQVAEGIDSSIKGMNSYNNHTMENNG HHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NKSHCDSTQNQPDKTESISMEHKRNVLKEEKYSDVKSKDIGYEAVMNSVILIAQKNVSFL CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHCCCCHHHHHCCEEEEEECCHHHH KFVSQIEEHNLKFLLENYYQRLKISNKLDYVNLGENGCIEFAGALLLLIYSYAKNDTTAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH NACNQALIMAFKGASPRIFSDVMDYIINEETTIPYADWSAVYRYLKDNYGTWIIKIEFAS HHHCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECC DYTMRDHFRYSKFMDGETENEASVTSKKGRNGLSHGANIQITKVNIESNINSNQVENNLY CCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHH KHSVAFEEVEIKDKNEKVIQNNNEYITENIKMNNEIINKSTLISQEQAFNVLEKRLEKAT HHHHHHHHEEECCCCCHHHHCCCCEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIVKGGQSYITKIMNAPDNEVYTEILNALGGIRSSLTLKAFNSTKGFFVKKTPDATIVA HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHCEEEEEECCCCCEEEEECCCCEEEE KGVATVEVEEELKAIVDEVVDEAVDKNKVWAKIRALAVLVFKKTIAVPKGVLAFTFDDTT CCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH VLGTAVGKIAYDTAREFIFGSKVKSNEALNDATFNKTKEQLDKELQAKRESYFQDEEMVR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LRNNLFEARKKAEAEEREKFKKSLGLEDEFLNALKSLREEQKE HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ALGKMFEKTIKLVGTVSKVGVQLGADIVGTVAEKIDDDHEIKLRISEYGVKKGQSIKAI CHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCEEEEEEHHCCCCCCCCCHHH TTEVAGKSSEIVDRAVDNSINVLKIGSVIIKEGISQVAEGIDSSIKGMNSYNNHTMENNG HHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC NKSHCDSTQNQPDKTESISMEHKRNVLKEEKYSDVKSKDIGYEAVMNSVILIAQKNVSFL CCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCHHCCCCHHHHHCCEEEEEECCHHHH KFVSQIEEHNLKFLLENYYQRLKISNKLDYVNLGENGCIEFAGALLLLIYSYAKNDTTAI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCHHH NACNQALIMAFKGASPRIFSDVMDYIINEETTIPYADWSAVYRYLKDNYGTWIIKIEFAS HHHCHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECC DYTMRDHFRYSKFMDGETENEASVTSKKGRNGLSHGANIQITKVNIESNINSNQVENNLY CCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHH KHSVAFEEVEIKDKNEKVIQNNNEYITENIKMNNEIINKSTLISQEQAFNVLEKRLEKAT HHHHHHHHEEECCCCCHHHHCCCCEEEECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHH ETIVKGGQSYITKIMNAPDNEVYTEILNALGGIRSSLTLKAFNSTKGFFVKKTPDATIVA HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCHHHCEEEEEECCCCCEEEEECCCCEEEE KGVATVEVEEELKAIVDEVVDEAVDKNKVWAKIRALAVLVFKKTIAVPKGVLAFTFDDTT CCCEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH VLGTAVGKIAYDTAREFIFGSKVKSNEALNDATFNKTKEQLDKELQAKRESYFQDEEMVR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH LRNNLFEARKKAEAEEREKFKKSLGLEDEFLNALKSLREEQKE HHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA