Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is 187934345

Identifier: 187934345

GI number: 187934345

Start: 1406002

End: 1407294

Strand: Reverse

Name: 187934345

Synonym: CLL_A1369

Alternate gene names: NA

Gene position: 1407294-1406002 (Counterclockwise)

Preceding gene: 187932417

Following gene: 187935157

Centisome position: 37.03

GC content: 32.71

Gene sequence:

>1293_bases
ATGGAAAATATGATTGATTTAATCGTAGTTGGTGCAGGACCTGCAGGACTAATGACTGCAAAAAGAGCAGCAGAATTAGG
TTTAAAAGTAACAGTCATTGAAATTAAGAAAGATATTACAAAAGTAAAACGTGCATGCTCTGCTCAATTTGTTACCGATG
AAGGATATGAAAATGAAACTATTAAAATAGAAGATAATAAAATAATCTTTACAAAGAATGGGTTTCATATAAATTATACT
GGACGTTTATTAAATATTGTTGACAACTATCATCACTCTCCTAGTGGTCATAAAATACATTTAGCACATCCAGATCGTAG
ACCATTTGCTGTAAAGTTCGATAAAGGACATCTACTTTCAGATTTATGTAAAGATTGTGAAGAACTAGGTGTAGAATTAA
TGTTAGAAACTATTGCATATGGGGGAGAAGACTTAGGTGACCATGTTAGAGTAGACATTAAAAATCATAAAAAAAACTCT
TCTATTTTAGCAAAGAAATTAGTTATTGCTGAAGGTGCCAATGCAAAATTAACTGGATTATTTGGTCTTAACAAAGGAAG
AACTTACTATGGCACACCTTTTGTATTTAGTTGTATTATGGAAGGTACTACTGGGTTTGAACCACAAAGTTGGAATCAAT
TCTATGGAAGTGAATATCATCCTTTTGCAGAAGTAATGGTGGAATCTGCTATAGAAGATAATGATGCAATTGAACTTACC
ATTATGGGTAATAAAGATTTAAGACCTGATATTCTTTTCGAAAAACTTATTAAAGATAGCCCAATGAGTCACCACTTTAC
TAATGCCCGTGTCATAGAAAGAAGAGGATGTTCACTTAAGTCGTTTGATTCACTTCTAAAACCATACAGCGGTAATGTAC
TTGTAATTGGTGATAGTGCAGCTCATATTGAAGTTATTGTTCAAGGAGCATTAATGTGTGGATACCATGCAGCTAATGCT
ATAAATGATGAACTTATGGGCATAAATGGTTTTGAGAAATATACAAGCTGGTGGGATAAAGCATTTGATTTCAATCGTAC
TAACCCTGTTGAATTCGTTAAGCTATATGGTAGTTTAGGTATGAGACCAAAATACTCAGATGAAGAACTTGACTATATGT
TTTCTTTGGTTGAAGGCGAATTAGTTAATGGAAATTTCAGTCAGTTTGAGGTTCCTAAAAACGTATGGAAGGCAATTTTA
GCGCATAAGGCTCAGATTGAAAATGAAAACCCAATTTTATTTGATAAAATAAAGAATATCCATGAGTTGAATCGTGAAGG
AAAACTTAATTAA

Upstream 100 bases:

>100_bases
AATTCAAAGTGAAAGACCTATTATATATGAAAAAATCAAAAAAATGAATACTATGACTTTAACAGATACATTTAATAATT
AATTTGAGAGGAGCTATAAT

Downstream 100 bases:

>100_bases
AACCATGTTATAGATAACTATTATTTTTAAGAATGGGGAAATGATATGAGTAAAACAGATAATGAAAATATTTTTGATAT
TAATAAGAAAATTATTGAGC

Product: pyridine nucleotide-disulphide oxidoreductase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT
GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS
SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT
IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA
INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL
AHKAQIENENPILFDKIKNIHELNREGKLN

Sequences:

>Translated_430_residues
MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT
GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS
SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT
IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA
INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL
AHKAQIENENPILFDKIKNIHELNREGKLN
>Mature_430_residues
MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENETIKIEDNKIIFTKNGFHINYT
GRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLSDLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNS
SILAKKLVIAEGANAKLTGLFGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT
IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSAAHIEVIVQGALMCGYHAANA
INDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLGMRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAIL
AHKAQIENENPILFDKIKNIHELNREGKLN

Specific function: Unknown

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48356; Mature: 48356

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENET
CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCE
IKIEDNKIIFTKNGFHINYTGRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLS
EEEECCEEEEEECCEEEEECHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCHHH
DLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNSSILAKKLVIAEGANAKLTGL
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHEEECCCCCEEEEE
FGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT
EECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEE
IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSA
EECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCEEEEECCC
AHIEVIVQGALMCGYHAANAINDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLG
CEEHHEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
MRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAILAHKAQIENENPILFDKIKNI
CCCCCCCHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HELNREGKLN
HHHCCCCCCC
>Mature Secondary Structure
MENMIDLIVVGAGPAGLMTAKRAAELGLKVTVIEIKKDITKVKRACSAQFVTDEGYENET
CCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCE
IKIEDNKIIFTKNGFHINYTGRLLNIVDNYHHSPSGHKIHLAHPDRRPFAVKFDKGHLLS
EEEECCEEEEEECCEEEEECHHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCHHH
DLCKDCEELGVELMLETIAYGGEDLGDHVRVDIKNHKKNSSILAKKLVIAEGANAKLTGL
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHEEECCCCCEEEEE
FGLNKGRTYYGTPFVFSCIMEGTTGFEPQSWNQFYGSEYHPFAEVMVESAIEDNDAIELT
EECCCCCEEECCHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCEEEE
IMGNKDLRPDILFEKLIKDSPMSHHFTNARVIERRGCSLKSFDSLLKPYSGNVLVIGDSA
EECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEHHCCCCHHHHHHHHCCCCCCEEEEECCC
AHIEVIVQGALMCGYHAANAINDELMGINGFEKYTSWWDKAFDFNRTNPVEFVKLYGSLG
CEEHHEEHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
MRPKYSDEELDYMFSLVEGELVNGNFSQFEVPKNVWKAILAHKAQIENENPILFDKIKNI
CCCCCCCHHHHHHHHHHCCEEECCCCCCEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHH
HELNREGKLN
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA