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The map label for this gene is pld [H]

Identifier: 187934195

GI number: 187934195

Start: 2264173

End: 2265681

Strand: Reverse

Name: pld [H]

Synonym: CLL_A2175

Alternate gene names: 187934195

Gene position: 2265681-2264173 (Counterclockwise)

Preceding gene: 187934137

Following gene: 187933512

Centisome position: 59.62

GC content: 30.15

Gene sequence:

>1509_bases
ATGAAAAAAAATAAAATATTGTGTTGTATAACATCTGTTTTAATAACATTTAATATGTTTGTTTCAACGCAATTTACAAC
TACTGCAGAAGCTAGTTGTATAACTAATCAAAGTACCACTACGGCAGGTGCAAATTATTTAATTAATCAAGAGCGTTCAG
AAGAATCGACTTTAGATGCTGAGGTGTCTTTCTCACCTTTTGATAATCAAGTAGAAAAAGTAATTAAAGTTTTAGATGAA
GCACAAGATGAGGTAGTTATTGCACATTATAATGCACGTTTAACACCAATATTATCTAAACTCGTCGATTTATCAAAAAA
AGGAGTAAAGATTAAGGTAGTAGTGGACAAGGATAATGCACTTAAAGAATGGAATGTAGGTGATGATTATCTAGAAGAAA
ATGGGATAGAAGTTATAAGGTCTAAGCCTGAAAAGACAATAGGAACTACAAATTATTCAATAATGCATTTGAAATCAGTT
GTAATAGATAAAAAAACTGTTATGACTGGGTCACTTAATTGGAATGCTACAGCTGCATATTGTAATGATGAAAATATGGT
TGTTATAAGAAATGAACAAGTAGCTGAAATTTATAGAAATCAAATTCTTCAATTATTTGAAAAAAAGCCTTTTGAAATAG
AAAAGGATCAAGATAGTGATATAGCATCTATTCATTTTTCACCTGAACAAGGATTATCAGGATTTATTCAAAAGCAAATA
GATAAAGCAAATGAATCTATTGAAGTTTCAATGTTTACATTTACGGAAAAATATATAAGTAAGAGCTTATTAAATGCAGC
AAAAAGAGGGGTTAAAGTAAAAGTAATAATGGAAAAGAAACAGTGTGATTTTTCTAAAGTAGATGAAGCATTAGAAAATC
AACCAAATGTAGAGTTACATAGAGTTGGTAATACATTATCGCAATTTTCTGCCATGCATCAAAAATATTGTGTAATTGAT
GATAAAACAGTTATAACAGGTTCTGCTAACTGGACAGCATCTGGTACAAAATTTAATGATGAAGATATTTTAATTTTAAG
TAATAGAGATATTGCTAAGAAATATCATCAAAATTTTTTGGATTTAATACATATTTATGAAGGCATATCCTCTACTTTTG
AAGGTGAAGAAATTCGTGAAAAAGCACCTGTATTATTCCATGCCAACTGTTCATCAACACAACCTGGAGATAAAGTTGTT
GTAGTTGGAAATGTTCCAGAACTAGGTGACTGGAATGTAGAAAATGGATTGGTAATGTCAACTTCTGATGATTTATTTCC
TGATTGGTTTGTTAAGGCTGATATTGATCCAGGAGTTAGTATTGAATATAAATATGTAATATTAAGAGAAAATGGTGATG
CTGAATGGGAAGACGGGTCAAATCGTAACATAAATATTCCAGATACAGCAAGAGCATCAGAAATAAGTGGAACATACGGA
AACACTGCTGATAACTGGACTCCAGCACAAAATAATAAAACTACAAATAATAATCATCAAGAAGACTAA

Upstream 100 bases:

>100_bases
GAATTTGAATAATACTACATATTATTACATTTATTTTATTTACTTCCATTTAATATTAAAGTATTATAGTAAAGACTTTA
AATTATAGGGGGATATGATA

Downstream 100 bases:

>100_bases
ATATACGAGCTACTATTAACTAGCATATTGATTTATTAAATTTTCAATATGCCTAATAGTAGTTCTTTAAAAAATCTAAA
GACATAAAAATATTAGGGGG

Product: starch binding domain protein

Products: NA

Alternate protein names: PLD; Choline phosphatase [H]

Number of amino acids: Translated: 502; Mature: 502

Protein sequence:

>502_residues
MKKNKILCCITSVLITFNMFVSTQFTTTAEASCITNQSTTTAGANYLINQERSEESTLDAEVSFSPFDNQVEKVIKVLDE
AQDEVVIAHYNARLTPILSKLVDLSKKGVKIKVVVDKDNALKEWNVGDDYLEENGIEVIRSKPEKTIGTTNYSIMHLKSV
VIDKKTVMTGSLNWNATAAYCNDENMVVIRNEQVAEIYRNQILQLFEKKPFEIEKDQDSDIASIHFSPEQGLSGFIQKQI
DKANESIEVSMFTFTEKYISKSLLNAAKRGVKVKVIMEKKQCDFSKVDEALENQPNVELHRVGNTLSQFSAMHQKYCVID
DKTVITGSANWTASGTKFNDEDILILSNRDIAKKYHQNFLDLIHIYEGISSTFEGEEIREKAPVLFHANCSSTQPGDKVV
VVGNVPELGDWNVENGLVMSTSDDLFPDWFVKADIDPGVSIEYKYVILRENGDAEWEDGSNRNINIPDTARASEISGTYG
NTADNWTPAQNNKTTNNNHQED

Sequences:

>Translated_502_residues
MKKNKILCCITSVLITFNMFVSTQFTTTAEASCITNQSTTTAGANYLINQERSEESTLDAEVSFSPFDNQVEKVIKVLDE
AQDEVVIAHYNARLTPILSKLVDLSKKGVKIKVVVDKDNALKEWNVGDDYLEENGIEVIRSKPEKTIGTTNYSIMHLKSV
VIDKKTVMTGSLNWNATAAYCNDENMVVIRNEQVAEIYRNQILQLFEKKPFEIEKDQDSDIASIHFSPEQGLSGFIQKQI
DKANESIEVSMFTFTEKYISKSLLNAAKRGVKVKVIMEKKQCDFSKVDEALENQPNVELHRVGNTLSQFSAMHQKYCVID
DKTVITGSANWTASGTKFNDEDILILSNRDIAKKYHQNFLDLIHIYEGISSTFEGEEIREKAPVLFHANCSSTQPGDKVV
VVGNVPELGDWNVENGLVMSTSDDLFPDWFVKADIDPGVSIEYKYVILRENGDAEWEDGSNRNINIPDTARASEISGTYG
NTADNWTPAQNNKTTNNNHQED
>Mature_502_residues
MKKNKILCCITSVLITFNMFVSTQFTTTAEASCITNQSTTTAGANYLINQERSEESTLDAEVSFSPFDNQVEKVIKVLDE
AQDEVVIAHYNARLTPILSKLVDLSKKGVKIKVVVDKDNALKEWNVGDDYLEENGIEVIRSKPEKTIGTTNYSIMHLKSV
VIDKKTVMTGSLNWNATAAYCNDENMVVIRNEQVAEIYRNQILQLFEKKPFEIEKDQDSDIASIHFSPEQGLSGFIQKQI
DKANESIEVSMFTFTEKYISKSLLNAAKRGVKVKVIMEKKQCDFSKVDEALENQPNVELHRVGNTLSQFSAMHQKYCVID
DKTVITGSANWTASGTKFNDEDILILSNRDIAKKYHQNFLDLIHIYEGISSTFEGEEIREKAPVLFHANCSSTQPGDKVV
VVGNVPELGDWNVENGLVMSTSDDLFPDWFVKADIDPGVSIEYKYVILRENGDAEWEDGSNRNINIPDTARASEISGTYG
NTADNWTPAQNNKTTNNNHQED

Specific function: Could be a virulence factor [H]

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PLD phosphodiesterase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001736 [H]

Pfam domain/function: NA

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 56380; Mature: 56380

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS51166 CBM20 ; PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNKILCCITSVLITFNMFVSTQFTTTAEASCITNQSTTTAGANYLINQERSEESTLDA
CCCCCEEHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCE
EVSFSPFDNQVEKVIKVLDEAQDEVVIAHYNARLTPILSKLVDLSKKGVKIKVVVDKDNA
EEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCC
LKEWNVGDDYLEENGIEVIRSKPEKTIGTTNYSIMHLKSVVIDKKTVMTGSLNWNATAAY
CCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCEEEEE
CNDENMVVIRNEQVAEIYRNQILQLFEKKPFEIEKDQDSDIASIHFSPEQGLSGFIQKQI
ECCCCEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHH
DKANESIEVSMFTFTEKYISKSLLNAAKRGVKVKVIMEKKQCDFSKVDEALENQPNVELH
HHCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEE
RVGNTLSQFSAMHQKYCVIDDKTVITGSANWTASGTKFNDEDILILSNRDIAKKYHQNFL
HHHHHHHHHHHHHHCEEEECCCEEEECCCCCEECCCEECCCCEEEECCCHHHHHHHHHHH
DLIHIYEGISSTFEGEEIREKAPVLFHANCSSTQPGDKVVVVGNVPELGDWNVENGLVMS
HHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
TSDDLFPDWFVKADIDPGVSIEYKYVILRENGDAEWEDGSNRNINIPDTARASEISGTYG
CCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCHHHCCCCCC
NTADNWTPAQNNKTTNNNHQED
CCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKNKILCCITSVLITFNMFVSTQFTTTAEASCITNQSTTTAGANYLINQERSEESTLDA
CCCCCEEHHHHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCCE
EVSFSPFDNQVEKVIKVLDEAQDEVVIAHYNARLTPILSKLVDLSKKGVKIKVVVDKDNA
EEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEEECCCCC
LKEWNVGDDYLEENGIEVIRSKPEKTIGTTNYSIMHLKSVVIDKKTVMTGSLNWNATAAY
CCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCEEHEEHHHHHCCCCEEEEECCCCCEEEEE
CNDENMVVIRNEQVAEIYRNQILQLFEKKPFEIEKDQDSDIASIHFSPEQGLSGFIQKQI
ECCCCEEEECCCHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECHHHHHHHHHHHHH
DKANESIEVSMFTFTEKYISKSLLNAAKRGVKVKVIMEKKQCDFSKVDEALENQPNVELH
HHCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCEEEE
RVGNTLSQFSAMHQKYCVIDDKTVITGSANWTASGTKFNDEDILILSNRDIAKKYHQNFL
HHHHHHHHHHHHHHCEEEECCCEEEECCCCCEECCCEECCCCEEEECCCHHHHHHHHHHH
DLIHIYEGISSTFEGEEIREKAPVLFHANCSSTQPGDKVVVVGNVPELGDWNVENGLVMS
HHHHHHHHHHCCCCCHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEE
TSDDLFPDWFVKADIDPGVSIEYKYVILRENGDAEWEDGSNRNINIPDTARASEISGTYG
CCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCCCCCCCCCCEECCCCCCCHHHCCCCCC
NTADNWTPAQNNKTTNNNHQED
CCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]