| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187934102
Identifier: 187934102
GI number: 187934102
Start: 2788796
End: 2789335
Strand: Reverse
Name: 187934102
Synonym: CLL_A2671
Alternate gene names: NA
Gene position: 2789335-2788796 (Counterclockwise)
Preceding gene: 187933318
Following gene: 187933109
Centisome position: 73.4
GC content: 30.37
Gene sequence:
>540_bases ATGATTGTTTTAATTACAGGCGCTTCTCATACAGGCAAAACTCTGTTGGCGCAGAAAATTCTTAAAAAATACCAATATCC ATACTTCTCTATAGACCTTTTGAAAATGGGGTTAATACGAAGTAAAAACACAGATTTAACTCCAGAAGATGACAAAGAAC TGGAAGATTATTTGTGGCCCATTGTTAAAGAAATAATAAAGACAGCAATCGAAAATAAACAAAATCTTGTGGTAGAAGGT TGTTACATTCCGTTTGATTGGAGGGGATGTTTTGATGATGAATATTTGAGAGAGATTCAATATTATTGTCTTGTGATGAG TAGAAAATATATTGAAAATCACTTTTTAGATATAAAGAATTATGCCAATGTAATTGAGCAGCGCATTGACGATTCATGGT GTACAATGGATTCTACTCTTGAAGATAACGCTTACTATCTGAATATGTGCAAAAAATATAACTGTAATTATATTCTGATT GATGATTGTTATCAAGTGGAAGCTAATTTAAAGGATATAATTAATGAGAAAATATTTTAA
Upstream 100 bases:
>100_bases GGTTATTAAAGAGCAACAGGTTGAGAGACAAGGGATTGTCCTTGCAAACTTTGTTATGGAGAAAAAAGATTAGCTAGAAT TTATAGGAGATGATGACAAA
Downstream 100 bases:
>100_bases AGTAATTACAATAATTATAGCTGTAATTTTTTTGAGTGGTTGTAACAATATAAAGCTTGAAAAATATACTGGAGAAAATT TAAATGTTGGAGTTATAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MIVLITGASHTGKTLLAQKILKKYQYPYFSIDLLKMGLIRSKNTDLTPEDDKELEDYLWPIVKEIIKTAIENKQNLVVEG CYIPFDWRGCFDDEYLREIQYYCLVMSRKYIENHFLDIKNYANVIEQRIDDSWCTMDSTLEDNAYYLNMCKKYNCNYILI DDCYQVEANLKDIINEKIF
Sequences:
>Translated_179_residues MIVLITGASHTGKTLLAQKILKKYQYPYFSIDLLKMGLIRSKNTDLTPEDDKELEDYLWPIVKEIIKTAIENKQNLVVEG CYIPFDWRGCFDDEYLREIQYYCLVMSRKYIENHFLDIKNYANVIEQRIDDSWCTMDSTLEDNAYYLNMCKKYNCNYILI DDCYQVEANLKDIINEKIF >Mature_179_residues MIVLITGASHTGKTLLAQKILKKYQYPYFSIDLLKMGLIRSKNTDLTPEDDKELEDYLWPIVKEIIKTAIENKQNLVVEG CYIPFDWRGCFDDEYLREIQYYCLVMSRKYIENHFLDIKNYANVIEQRIDDSWCTMDSTLEDNAYYLNMCKKYNCNYILI DDCYQVEANLKDIINEKIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21328; Mature: 21328
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLITGASHTGKTLLAQKILKKYQYPYFSIDLLKMGLIRSKNTDLTPEDDKELEDYLWP CEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IVKEIIKTAIENKQNLVVEGCYIPFDWRGCFDDEYLREIQYYCLVMSRKYIENHFLDIKN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YANVIEQRIDDSWCTMDSTLEDNAYYLNMCKKYNCNYILIDDCYQVEANLKDIINEKIF HHHHHHHHHCCCHHCCCCCCCCCHHEEEHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVLITGASHTGKTLLAQKILKKYQYPYFSIDLLKMGLIRSKNTDLTPEDDKELEDYLWP CEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH IVKEIIKTAIENKQNLVVEGCYIPFDWRGCFDDEYLREIQYYCLVMSRKYIENHFLDIKN HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH YANVIEQRIDDSWCTMDSTLEDNAYYLNMCKKYNCNYILIDDCYQVEANLKDIINEKIF HHHHHHHHHCCCHHCCCCCCCCCHHEEEHHHHCCCCEEEEECCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA